Conserved Protein Domain Family
PHD2_PHF19

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cd15581: PHD2_PHF19 
PHD finger 2 found in PHD finger protein 19 (PHF19)
PHF19, also termed Polycomb-like protein 3 (PCL3), is a component of the Polycomb repressive complex 2 (PRC2), which is the major H3K27 methyltransferase that regulates pluripotency, differentiation, and tumorigenesis through catalysis of histone H3 lysine 27 trimethylation (H3K27me3) on chromatin. PHF19 consists of an N-terminal Tudor domain followed by two plant homeodomain (PHD) fingers, and a C-terminal MTF2 domain. It binds H3K36me3 through its Tudor domain and recruits the PRC2 complex and the H3K36me3 demethylase NO66 to embryonic stem cell genes during differentiation. Moreover, PHF19 and its upstream regulator, Akt, play roles in the phenotype switch of melanoma cells from proliferative to invasive states. This model corresponds to the second PHD finger.
Statistics
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PSSM-Id: 277056
Aligned: 4 rows
Threshold Bit Score: 116.158
Created: 10-Sep-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         # #            #  #    #  #                  #  #  
Q5T6S3       197 YCYCGGPGeWYLRMLQCYRCRQWFHEACTQCLNEPMMFGDRFYLFFCSVCNQ 248 human
EMP34609     198 YCYCGGPGeWYLKMLQCYSCRQWFHEACTQCLSDPMMFGDRFYVFFCAVCNQ 249 green seaturtle
NP_001072446 196 YCYCGGPGeWYLKMIQCYRCRQWFHEACMQCLNEPMMFGDRFYAFLCSVCNQ 247 western clawed frog
NP_001121998 193 YCYCGGPG-WYLKMLQCFRCEQWFHEACTQCLQDSMMFGDRFYLFICAVCNK 243 zebrafish

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