2YT5


Conserved Protein Domain Family
PHD1_MTF2

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cd15578: PHD1_MTF2 
Click on image for an interactive view with Cn3D
PHD finger 1 found in metal-response element-binding transcription factor 2 (MTF2)
MTF2, also termed metal regulatory transcription factor 2, or metal-response element DNA-binding protein M96, or polycomb-like protein 2 (PCL2), complexes with the polycomb repressive complex-2 (PRC2) in embryonic stem cells and regulates the transcriptional networks during embryonic stem cell self-renewal and differentiation. It recruits the PRC2 complex to the inactive X chromosome and target loci in embryonic stem cells. Moreover, MTF2 is required for PRC2-mediated Hox cluster repression. It activates the Cdkn2a gene and promotes cellular senescence, thus suppressing the catalytic activity of PRC2 locally. MTF2 consists of an N-terminal Tudor domain followed by two PHD fingers, and a C-terminal MTF2 domain. This model corresponds to the first PHD finger.
Statistics
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PSSM-Id: 277053
Aligned: 12 rows
Threshold Bit Score: 94.383
Created: 12-Aug-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteputative
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C CClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #             #  #    #  #                  #  #  
2YT5_A          8 VCTICQEEYSEaPNEMVICDKCGQGYHQLCHTPHIds-sVIDSDEKWLCRQCVF 60   house mouse
NP_989839     104 VCTICQEEYSEaPNEMVICDKCGQGYHQLCHTPNIds-sVIDSDDKWLCRQCVF 156  chicken
NP_001038729  103 LCSICQNESSEpPNEIVICDKCGQGYHQLCHAPVIds-sVIDSDDKWLCRQCVF 155  zebrafish
ACT63869       87 LCSICQNESSEpPNEIVICDKCGQGYHQLCHAPIIdp-sVIASDDKWLCRQCVF 139  brown garden snail
AAH90200      104 VCSICQEEYSDaPNEIVICDKCGQGYHQLCHTPKIdp-nVIDTDEKWLCRQCIF 156  African clawed frog
XP_002130960  224 TCTMCRDGNSDpPNEIVLCDKCGQGYHQLCHVPPIdtsvLNEEDAPWQCRTCVF 277  Ciona intestinalis
XP_002588201  265 TCTLCSDGTSEePNQIVICDRCGQGYHQLCHQPPIld-sVLEPEVQWLCRQCIF 317  Florida lancelet
XP_794791     182 TCFVCNDGMSDfPNEIVICDRCGRGYHQQCHSPSIegsiLQNEDEPWHCRPCVF 235  purple urchin
ELU17305       74 VCCLCRGASSEhPNEIVLCDGCGQGFHQLCHNPVIed-dALMLDTPWSCRLCLH 126  Capitella sp. I Grassle & Grassle, 1976
AGB56249      331 SCCVCQTDQSEkPNEIVLCDNCGLGYHQACHNPTIgd-dVLAPDVEWCCRLCIF 383  Pacific oyster
XP_002114991   66 VCIVCKSGSSEsPNEIVLCDRCSIGYHQQCHSPQIpe-sVLKPDVPWLCHYCQS 118  Trichoplax adhaerens
XP_004207428  209 ICIVCKKDNPDsEDEIVLCDKCSIGFHQNCHKPKIds-rVLSPDIPWECRFCEQ 261  green hydra

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