Conserved Protein Domain Family
PHD_JMJD2C

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cd15577: PHD_JMJD2C 
PHD finger found in Jumonji domain-containing protein 2C (JMJD2C)
JMJD2C, also termed lysine-specific demethylase 4C (KDM4C), or gene amplified in squamous cell carcinoma 1 protein (GASC-1 protein), or JmjC domain-containing histone demethylation protein 3C (JHDM3C), is an epigenetic factor that catalyzes the demethylation of di- and trimethylated H3K9 and H3K36, and may be involved in the development and/or progression of various types of cancer including esophageal squamous cell carcinoma (ESC) and breast cancer. It selectively interacts with hypoxia-inducible factor 1alpha (HIF1alpha) and plays a role in breast cancer progression. Moreover, JMJD2C may play an important role in the treatment of obesity and its complications through modulating the regulation of adipogenesis by nuclear receptor peroxisome proliferator-activated receptor gamma (PPARgamma). JMJD2C contains jmjN and jmjC domains in the N-terminal region, followed by a canonical Cys4HisCys3 plant homeodomain (PHD) finger, a non-canonical extended PHD (ePHD) finger, Cys2HisCys5HisCys2His, and a Tudor domain. This model corresponds to the canonical Cys4HisCys3 PHD finger.
Statistics
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PSSM-Id: 277052
Aligned: 4 rows
Threshold Bit Score: 186.96
Created: 7-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #                                                                        #  
Q9H3R0        644 HCAICTLLMPYhkpdssneendarwe---tkldevvtsegktkPLIPEMCFIYSEENieysPPNAFLEEDGTSLLISCAK 720  human
AAI54090      654 HCAICTLFLPYnksetyndeiqahwd---dlsngiisshsetqCLIPEMCFKSRKGKkqhsPPKNLIKEDDRSLLVTCAK 730  western clawe...
XP_003643040  656 HCAICTLLMPYykpdnldeenstyke--tnleetlaieneksrPLIPEMCFIYSEENtenyPSNALIDEDGTSLLISCAK 733  chicken
Q4T5K5        559 HCAVCTLFMPYyqvpalsannspqtsssmeapaapcigmrrtkPLIPEICFSFREQNcpptPTNPLLQEDGTSPLLYCQD 638  spotted green...
Feature 1         #    #  #             #  #
Q9H3R0        721 CCVRVHASCYGIPSHEIcdGWLCARC 746  human
AAI54090      731 CCVQVHSSCYGVPSHEIhdGWMCARC 756  western clawed frog
XP_003643040  734 CCIRVHASCYGVPSHEIhnEWLCSRC 759  chicken
Q4T5K5        639 CCLQVHASCYGVAANDVskQWSCDRC 664  spotted green pufferfish

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