Conserved Protein Domain Family
PHD4_NSD

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cd15567: PHD4_NSD 
PHD finger 4 found in nuclear receptor-binding SET domain-containing (NSD) proteins
The nuclear receptor binding SET domain (NSD) protein is a family of three HMTases, NSD1, NSD2/MMSET/WHSC1, and NSD3/WHSC1L1, that are critical in maintaining chromatin integrity. Reducing NSD activity through specific lysine-HMTase inhibitors appears promising to help suppress cancer growth. NSD proteins have specific mono- and dimethylase activities for H3K36, and they play non-redundant roles during development. NSD1 plays a role in several pathologies, including but not limited to Sotos and Weaver syndromes, acute myeloid leukemia, breast cancer, neuroblastoma, and glioblastoma formation. NSD2 is involved in cancer cell proliferation, survival, and tumor growth, by mediating constitutive NF-kappaB signaling via the cytokine autocrine loop. NSD3 is amplified in human breast cancer cell lines. Moreover, translocation resulting in NUP98 fusion to NSD3 leads to development of acute myeloid leukemia. NSD proteins contain a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-proline (PWWP) domains, five plant homeodomain (PHD) fingers, and an NSD-specific Cys-His rich domain (Cys5HisCysHis). This model corresponds to the fourth PHD finger.
Statistics
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PSSM-Id: 277042
Aligned: 24 rows
Threshold Bit Score: 61.8786
Created: 13-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #        #   #    #  #              #  #
O96028        833 WCFVCSKgGSLLCC-ESCPAAFHPDCLNIEmp---dGSWFCNDC 872  human
NP_733239    1001 WCYICVKgGELVCC-ETCPIAVHAHCRNIPik--tnESYICEEC 1041 fruit fly
XP_002164851  616 WCFICSQgGSLVCC-DTCPASFHVECYEDLkei-peNSWQCNDC 657  green hydra
XP_316738     784 WCFICGKgGNLICC-ETCPLACHPVCLQFTpp---dEKYFCEGC 823  Anopheles gambiae str. PEST
ELU04158      656 WCFACSVgGTLLCC-DTCPCAYHAECLNIQpp---eGAWHCELC 695  Capitella sp. I Grassle & Grassle, 1976
EFX71479      170 WCIVCSEgGSLICC-ERCPSSLHTHCAGLEke--pdGSFICYEC 210  common water flea
ESN96186      112 WCFSCGEgGSLVCC-ENCPASFHPACCETPps--eeEKWICELC 152  Helobdella robusta
EAT37605      988 WCFLCCKgGSLICC-ETCPTAFHLECLKFNpp---eGRYICEEC 1027 yellow fever mosquito
Q18605         61 ICGICSSgGNILCC-EQCPASFHLACIGYEssdlpdDNFYCNRC 103  Caenorhabditis elegans
XP_004989619  679 YCGICGEaGNLLCCeGGCLSSYHLFCVGLSca--pqGAFVCDAC 720  Salpingoeca sp. ATCC50818

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