Conserved Protein Domain Family
PHD3_NSD

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cd15566: PHD3_NSD 
PHD finger 3 found in nuclear receptor-binding SET domain-containing (NSD) proteins
The nuclear receptor binding SET domain (NSD) protein is a family of three HMTases, NSD1, NSD2/MMSET/WHSC1, and NSD3/WHSC1L1, that are critical in maintaining chromatin integrity. Reducing NSD activity through specific lysine-HMTase inhibitors appears promising to help suppress cancer growth. NSD proteins have specific mono- and dimethylase activities for H3K36, and they play non-redundant roles during development. NSD1 plays a role in several pathologies, including but not limited to Sotos and Weaver syndromes, acute myeloid leukemia, breast cancer, neuroblastoma, and glioblastoma formation. NSD2 is involved in cancer cell proliferation, survival, and tumor growth, by mediating constitutive NF-kappaB signaling via the cytokine autocrine loop. NSD3 is amplified in human breast cancer cell lines. Moreover, translocation resulting in NUP98 fusion to NSD3 leads to the development of acute myeloid leukemia. NSD proteins contain a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-proline (PWWP) domains, five plant homeodomain (PHD) fingers, and an NSD-specific Cys-His rich domain (Cys5HisCysHis). This model corresponds to the third PHD finger.
Statistics
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PSSM-Id: 277041
Aligned: 44 rows
Threshold Bit Score: 40.8754
Created: 9-Jan-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #                 #    #    #    #                                        # 
Q96L73       1639 ICITCHAanpanvsaskgRLMRCV--RCPVAYHAndfCLAAGskil--------------------------asnSIICP 1690 human
EQC34238      156 TCAKCEGsha-----astHAIQCM--RCPKAYHTs--CVPSTgvqrl------------------------hgtaRVVCV 202  Saprolegnia d...
EFN53620      497 SCHACGQpgdasapgqagELVPCR--RCPVAFHRr--CLPIElprhrdggaslarvwladyedesgkwldgveqsLLYCR 572  Chlorella var...
BAB08556      350 KCSVCENgevkt--dsnlQFAVCR--RCPKSYHRk--CLPREisfediededil---------trawdgllhnrvLIYCQ 414  thale cress
EFW41681      922 RCTTCQRrgt-----ddqPVVRCW--LCPRRFHNr--CTSPSfrlt--------------------------pggGFICD 966  Capsaspora ow...
XP_003246434   61 SCLICGKg---------hTELSCKnkKCPRVFHLs--CINKTriv----------------------------ksGFICP 101  pea aphid
CCO66721      923 TCQGCWDg---------gQIVCCD--LCPVSVHPe--CIGYTmeei-------------------------grtaRWSCP 964  Bathycoccus p...
XP_005534783  383 ACGICGQas--------gEMRFCIlsSCRRAFHPs--CMGAAeha----------------------------etPFLCD 424  Cyanidioschyz...
EPS96082      178 CCISCRDg---------gELFICS--YCPRVFHAk--CVGVSkkam-------------------------krirLASCP 219  Fomitopsis pi...
EMS25955      943 ACLTCGDg---------gEIYLCS--GCPRAYHAg-dCSGMSkkdl-------------------------kavvQYYCQ 985  Rhodosporidiu...
Feature 1          #
Q96L73       1691 NH 1692 human
EQC34238      203 TH 204  Saprolegnia diclina VS20
EFN53620      573 NH 574  Chlorella variabilis
BAB08556      415 EH 416  thale cress
EFW41681      967 SH 968  Capsaspora owczarzaki ATCC 30864
XP_003246434  102 SH 103  pea aphid
CCO66721      965 HH 966  Bathycoccus prasinos
XP_005534783  425 QH 426  Cyanidioschyzon merolae strain 10D
EPS96082      220 QH 221  Fomitopsis pinicola FP-58527 SS1
EMS25955      986 QH 987  Rhodosporidium toruloides NP11

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