Conserved Protein Domain Family
PHD2_NSD

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cd15565: PHD2_NSD 
PHD finger 2 found in nuclear receptor-binding SET domain-containing (NSD) proteins
The nuclear receptor binding SET domain (NSD) protein is a family of three HMTases, NSD1, NSD2/MMSET/WHSC1, and NSD3/WHSC1L1, that are critical in maintaining chromatin integrity. Reducing NSD activity through specific lysine-HMTase inhibitors appears promising to help suppress cancer growth. NSD proteins have specific mono- and dimethylase activities for H3K36, and they play non-redundant roles during development. NSD1 plays a role in several pathologies, including but not limited to Sotos and Weaver syndromes, acute myeloid leukemia, breast cancer, neuroblastoma, and glioblastoma formation. NSD2 is involved in cancer cell proliferation, survival, and tumor growth, by mediating constitutive NF-kappaB signaling via the cytokine autocrine loop. NSD3 is amplified in human breast cancer cell lines. Moreover, translocation resulting in NUP98 fusion to NSD3 leads to the development of acute myeloid leukemia. NSD proteins contain a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-proline (PWWP) domains, five plant homeodomain (PHD) fingers, and an NSD-specific Cys-His rich domain (Cys5HisCysHis). This model corresponds to the second PHD finger.
Statistics
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PSSM-Id: 277040
Aligned: 40 rows
Threshold Bit Score: 46.6515
Created: 23-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #                                         #    #    #  #                    
Q9BZ95        751 PCFSCKVsg--------------------------------kDVKRCSvgACGKFYHEACVrkfpt-------------- 784  human
CDS34145      305 LCRVCFKpvd------------------------------deEKEKCQmkDCGKHFHYKCIssisgv------------- 341  Hymenolepis m...
XP_001431526 1329 VCLLCKTkgtyppekkqkeeviassdendplednvrkiknksAISKCStaNCNRYFHLNCIqanplsk------------ 1396 Paramecium te...
CCD79173      344 LCSICGKpsetgs------------------------kdgagQLYACQviNCSRHFHRDCLsgwpgiltrps----dnva 395  Schistosoma m...
EHJ77076     1295 VCFVCKYpispk--------------------------ekqgHRQKCQvaHCNKYYHLECLdhwpqtqfng-----geis 1343 monarch butte...
XP_001768386   80 RCFKCKAfgs-----------------------------levDLVKCAhrNCGKYYHKDCSkgwvrip------------ 118  Physcomitrell...
ETV87018      479 ECPICRKlgl-----------------------------vgeSLVKCAleDCGKYYHPECLighplt------------- 516  Aphanomyces a...
ETO67572      179 RCQRCGFlgh-----------------------------eanGMRKCSvlDCGYHFHEQCLetde--------------- 214  Phytophthora ...
ETW06889      186 TCSTCGLlgd-----------------------------dgfDIYLCSiaGCGLYCHDRCMadgpi-------------- 222  Aphanomyces i...
EIE26432      373 ACAICKQtgv-----------------------------vgqHILKCKmgSCGYYFHNQCLnglrdsgllkihredpava 423  Coccomyxa sp....
Feature 1                   #  #
Q9BZ95        785 -aifesKGFRCPQH 797  human
CDS34145      342 -iikndCIQRCPSH 354  Hymenolepis microstoma
XP_001431526 1397 tldsnvELFRCPSH 1410 Paramecium tetraurelia strain d4-2
CCD79173      396 trtttfQVLRCPAH 409  Schistosoma mansoni
EHJ77076     1344 rtnkfsEALTCPRH 1357 monarch butterfly
XP_001768386  119 pkktdnGAMVCPRH 132  Physcomitrella patens subsp. patens
ETV87018      517 qvglkhKTLVCPRH 530  Aphanomyces astaci
ETO67572      215 ---tthTGFVCPRH 225  Phytophthora parasitica P1976
ETW06889      223 -daavaATFVCGRH 235  Aphanomyces invadans
EIE26432      424 nggngeRVFTCPAH 437  Coccomyxa sp. C-169

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