1F62


Conserved Protein Domain Family
PHD_BAZ1A_like

?
cd15544: PHD_BAZ1A_like 
Click on image for an interactive view with Cn3D
PHD finger found in bromodomain adjacent to zinc finger domain protein BAZ1A and BAZ1B
BAZ1A, also termed ATP-dependent chromatin-remodeling protein, or ATP-utilizing chromatin assembly and remodeling factor 1 (ACF1), or CHRAC subunit ACF1, or Williams syndrome transcription factor-related chromatin-remodeling factor 180 (WCRF180), or WALp1, is a subunit of the conserved imitation switch (ISWI)-family ATP-dependent chromatin assembly and remodeling factor (ACF)/chromatin accessibility complex (CHRAC) chromatin remodeling complex, which is required for DNA replication through heterochromatin. It alters the remodeling properties of the ATPase motor protein sucrose nonfermenting-2 homolog (SNF2H). Moreover, BAZ1A and its complexes play important roles in DNA double-strand break (DSB) repair. It is essential for averting improper gene expression during spermatogenesis. It also regulates transcriptional repression of vitamin D3 receptor-regulated genes. BAZ1B, also termed Tyrosine-protein kinase BAZ1B, or Williams syndrome transcription factor (WSTF), or Williams-Beuren syndrome chromosomal region 10 protein, Williams-Beuren syndrome chromosomal region 9 protein, or WALp2, is a multifunctional protein implicated in several nuclear processes, including replication, transcription, and the DNA damage response. BAZ1B/WSTF, together with the imitation switch (ISWI) ATPase, forms a WSTF-ISWI chromatin remodeling complex (WICH), which transiently associates with the human inactive X chromosome (Xi) during late S-phase prior to BRCA1 and gamma-H2AX. Moreover, BAZ1B/WSTF, SNF2h, and nuclear myosin 1 (NM1) forms the chromatin remodeling complex B-WICH that is involved in regulating rDNA transcription. Both BAZ1A and BAZ1B contain a WAC motif, a DDT domain, BAZ 1 and BAZ 2 motifs, a WAKZ (WSTF/Acf1/KIAA0314/ZK783.4) motif, a plant homeodomain (PHD) finger, and a bromodomain.
Statistics
?
PSSM-Id: 277019
Aligned: 6 rows
Threshold Bit Score: 69.3619
Created: 14-Aug-2013
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Zn binding siteputative
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C CClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #           #  #    #  #              #  #
1F62_A          2 RCKVCRKKgeddKLILCDeCNkAFHLFCLRPALyevPDGEWQCPAC 47   human
Q9NRL2       1150 RCKICRKKgdaeNMVLCDgCDrGHHTYCVRPKLktvPEGDWFCPEC 1195 human
XP_003743492  915 RCKVCRGKatpdRMIRCEtCDlVFHLPCIKPALreiPRGEWFCKAC 960  western predatory mite
CCD59958     1252 RCRICRRKtdddNLLLCDgCNlAFHLYCLRPPLkrvPTGDWFCPTC 1297 Schistosoma mansoni
CBY24211      407 RCQKCRKKsdgeNMIICDgCDvAWHIYCHKPKIrkiPSGDWFCKDC 452  Oikopleura dioica
P47156        237 ACIVCRKTndpkRTILCDsCDkPFHIYCLSPPLervPSGDWICNTC 282  Saccharomyces cerevisiae S288c

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap