Conserved Protein Domain Family
PHD2_KMT2A_like

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cd15507: PHD2_KMT2A_like 
PHD finger 2 found in histone-lysine N-methyltransferase 2A (KMT2A) and 2B (KMT2B)
This family includes histone-lysine N-methyltransferase trithorax (Trx) like proteins, KMT2A (MLL1) and KMT2B (MLL2), which comprise the mammalian Trx branch of the COMPASS family, and are both essential for mammalian embryonic development. KMT2A regulates chromatin-mediated transcription through the catalysis of methylation of histone 3 lysine 4 (H3K4), and is frequently rearranged in acute leukemia. KMT2A functions as the catalytic subunit in the MLL1 complex. KMT2B is a second human homolog of Drosophila trithorax, located on chromosome 19 and functions as the catalytic subunit in the MLL2 complex. It plays a critical role in memory formation through mediating hippocampal H3K4 di- and trimethylation. It is also required for RNA polymerase II association and protection from DNA methylation at the MagohB CpG island promoter. Both KMT2A and KMT2B contain a CxxC (x for any residue) zinc finger domain, three plant homeodomain (PHD) fingers, an extended PHD (ePHD) finger, Cys2HisCys5HisCys2His, two FY (phenylalanine tyrosine)-rich domains, and a SET (Suppressor of variegation, Enhancer of zeste, Trithorax) domain. This model corresponds to the second PHD finger.
Statistics
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PSSM-Id: 276982
Aligned: 5 rows
Threshold Bit Score: 80.9747
Created: 8-Aug-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteputative
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C [CH] H [CH] C [CH]Click to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #            #  #    #  #                 #  #
Q9UMN6       1251 FCHVCGRkgrgskHLLECERCRHAYHPACLGPsyptratrkRRHWICSAC 1300 human
Q03164       1481 FCHVCGRqhqatkQLLECNKCRNSYHPECLGPnyptkptkkKKVWICTKC 1530 human
XP_002401627  854 TCIACGHrss-vsQLLRCSKCQQTYHTDCLGPgypskpsrkKKIWLCVKC 902  black-legged tick
XP_001622959   30 SCSTCVVcgq-qdKLLMCDKCQRGYHVDCLGPsypvvpegsEDTWICGRC 78   starlet sea anemone
AAI59185       84 FCNVCGQkgkakkPLLECELCQTNYHVNCLGPnyplkaprsGKGWTCSAC 133  western clawed frog

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