2KU3


Conserved Protein Domain Family
PHD_BRPF_JADE_like

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cd15492: PHD_BRPF_JADE_like 
Click on image for an interactive view with Cn3D
PHD finger found in BRPF proteins, Jade proteins, protein AF-10, AF-17, and similar proteins
The family includes BRPF proteins, Jade proteins, protein AF-10 and AF-17. BRPF proteins are scaffold proteins that form monocytic leukemic zinc-finger protein (MOZ)/MOZ-related factor (MORF) H3 histone acetyltransferase (HAT) complexes with other regulatory subunits, such as inhibitor of growth 5 (ING5) and Esa1-associated factor 6 ortholog (EAF6). BRPF proteins have multiple domains, including a canonical Cys4HisCys3 plant homeodomain (PHD) zinc finger followed by a non-canonical extended PHD (ePHD) finger, Cys2HisCys5HisCys2His, a bromodomain and a proline-tryptophan-tryptophan-proline (PWWP) domain. PHD and ePHD fingers both bind to lysine 4 of histone H3 (K4H3), bromodomains interact with acetylated lysines on N-terminal tails of histones and other proteins, and PWWP domains show histone-binding and chromatin association properties. Jade proteins are required for ING4 and ING5 to associate with histone acetyltransferase (HAT) HBO1 and EAF6, to form a HBO1 complex that has a histone H4-specific acetyltransferase activity, a reduced activity toward histone H3, and is responsible for the bulk of histone H4 acetylation in vivo. AF-10, also termed ALL1 (acute lymphoblastic leukemia)-fused gene from chromosome 10 protein, is a transcription factor that has been implicated in the development of leukemia following chromosomal rearrangements between the AF10 gene and one of at least two other genes, MLL and CALM. AF-17, also termed ALL1-fused gene from chromosome 17 protein, is a putative transcription factor that may play a role in multiple signaling pathways. All Jade proteins, AF-10, and AF-17 contain a canonical PHD finger followed by a non-canonical ePHD finger. This model corresponds to the canonical PHD finger.
Statistics
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PSSM-Id: 276967
Aligned: 43 rows
Threshold Bit Score: 66.8747
Created: 23-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Zn binding siteputative
Conserved site includes 8 residues -Click on image for an interactive view with Cn3D
Feature 1: Zn binding site [ion binding site], 8 residue positions
Conserved feature residue pattern:C C C C H C C CClick to see conserved feature residue pattern help
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #              #  #    #  #               #  #
2KU3_A         18 VCSICMDGesq-nsNVILFCdmCNLAVHQECYGVPy---IPEGQWLCRHC 63   human
ERG80528      376 FCDICRQTdye-edDEIIFCdgCNVGVHQSCYGLDs---VPHDDWLCHAC 421  pig roundworm
EJY65932      717 QCAICNNGdye-eeDMIVFCgnCNVPVHQSCYGIEq---LPEGDWVCYNC 762  Oxytricha trifallax
EYB84022      390 ACDICRACese-pdDEMVFCdgCNLCVHMSCYGLQv---LPPGEWLCMKC 435  Ancylostoma ceylanicum
XP_004034844   30 FCDVCLIKvpl-qkDELIYCdlCNGLTHQSCYGGQlqniIPENQWFCQRC 78   Ichthyophthirius multifiliis
CBY41301       31 GCSICEITdan-dvDPLVYCdkCNVAVHKLCYGIKt---IPEGDWFCNIC 76   Oikopleura dioica
EDQ49894        8 ACDVCRSAdgt-psDPLVYCdgCNVGVHANCYGNPlhheVPEGDWFCVQC 56   Physcomitrella patens
EPR59827      177 RCDICGNYdslpghDEMLLCdgCDVAVHQTCYYVKt---VPKADWYCQYC 223  Toxoplasma gondii GT1
EJY87604      654 KCEICLQFese-dqDQIVLCnlCLCSVHQSCYGKElakgLPEDEWICYRC 702  Oxytricha trifallax
Q8SQJ9        135 FCDICTKHtst-hnEALVVCqgCEICVHESCYGIQ----DLSSFWLCRKC 179  Encephalitozoon cuniculi

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