Conserved Protein Domain Family
selB_III

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cd15491: selB_III 
Domain III of selenocysteine-specific translation elongation factor
This family represents domain III of bacterial selenocysteine (Sec)-specific elongation factor (EFSec), homologous to domain III of EF-Tu. SelB is a specialized translation elongation factor responsible for the co-translational incorporation of selenocysteine into proteins by recoding of a UGA stop codon in the presence of a downstream mRNA hairpin loop, called Sec insertion sequence (SECIS) element.
Statistics
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PSSM-Id: 294012
Aligned: 90 rows
Threshold Bit Score: 80.9503
Created: 13-Aug-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ABB14917     267 KPTRlLDVKFTVLAsqekpVRHRQQIRFYLGTAERLGRVLLLdreELEPGGETYAQLMLEEPVVADRFDRFIIRSYspmV 346 Carboxydothermu...
ABB12206     266 ATSPrLDVDLTLLAeagltLTHWAPLHVHLGTLHRVAHVALLdgdTLAPGQRMRVQLVFDEPVFALPGDRFIVRNPqatR 345 Burkholderia sp...
WP_018507971 264 APTArFDVRLTLSLqaptaLVHWAPVHLHLGAAHVMARVALLegeSLSPGGSALAQLVTDRPLGTLHGDRFILRDAdarH 343 Thiobacillus th...
CDF86445     166 APTTrIDIDLQLLPsetraLAHWTPLHIHLGAQDVTGRVALLedeRLAPGERAFAQLVLNAPVQAVHGDRLVLRDQsaqR 245 Pseudomonas kna...
WP_020043854 266 VPTKrMDVKLKVLKteinpLKHWTPTHLHIGSDHLPARVAVLsggNISPGASGLAQLVLPRDAFALYGDRFVLRDQsaqR 345 alpha proteobac...
EXL05156     268 RPTDrIDALLQILSsekkpIGQWFPVRLHHASTEVGARIVLLrdeELQPGTEDRVQLVLDRPVSAAAGDRFVIRDVsaqR 347 Ochrobactrum an...
AHE98804     266 RPSArIDARVHVPGdapkpLRHWSPVHLHLGSARLMARVAVLegdAIEPGTQGFAQLVLENQTHALRGDRFVLRDPsarH 345 Thioalkalivibri...
WP_019574823 266 QASRrIDVRLRLLPda-paLAQWAPVHLHLGTAHLTAHVALLqgeRIEPGTEVRAQLVLDAPVFALPGDRLILRNAqasR 344 Curvibacter lan...
WP_019952926 267 TPLQrVDIAFELLAea-ppLAHWSGVHVHLGASHVTGHIALLegqQLAPGGRMLAQLVLDRPLHACCGDRLIVRDHgarH 345 Kushneria aurantia
BAO28021     275 HPLRrFQAELHVPStq-paLKHWTPVHVHLGATDITGRVALLdctEVGAGGTALAEILLDRETLAVRGDRFVLRDAsaqR 353 Sulfuritalea hy...
ABB14917     347 TIGGGEI 353 Carboxydothermus hydrogenoformans Z-2901
ABB12206     346 TVGGGRV 352 Burkholderia sp. 383
WP_018507971 344 TIGGGKV 350 Thiobacillus thioparus
CDF86445     246 TIGGGRV 252 Pseudomonas knackmussii B13
WP_020043854 346 TIAGGRI 352 alpha proteobacterium SCGC AAA298-K06
EXL05156     348 TIGGGRF 354 Ochrobactrum anthropi
AHE98804     346 NLAGGTV 352 Thioalkalivibrio thiocyanoxidans ARh 4
WP_019574823 345 TIAGGWV 351 Curvibacter lanceolatus
WP_019952926 346 TLGGGVV 352 Kushneria aurantia
BAO28021     354 TIGGGRV 360 Sulfuritalea hydrogenivorans sk43H
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