3VW7


Conserved Protein Domain Family
7tmA_PAR1

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cd15369: 7tmA_PAR1 
Click on image for an interactive view with Cn3D
protease-activated receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors
Protease-acted receptors (PARs) are seven-transmembrane proteins that belong to the class A G-protein coupled receptor (GPCR) family. Four different types of the protease-activated receptors have been identified: PAR1, PAR2, PAR3, and PAR4. PARs are predominantly expressed in platelets and are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. PAR1, PA3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.
Statistics
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PSSM-Id: 320491
Aligned: 7 rows
Threshold Bit Score: 384.503
Created: 19-Nov-2008
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 45 residues -Click on image for an interactive view with Cn3D
Feature 1:putative peptide ligand binding pocket [polypeptide binding site]
Evidence:
  • Comment:also based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.
  • Structure:3VW7: Human protease-activated receptor 1 (PAR1) bound with antagonist vorapaxar, contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               #  ##            ###### #
3VW7_A        21 LFVPSVYTGVFVVSLPLNIMAIVVFILKMKvkkPAVVYMLHLATADVLFVSVLPFKISYYFsgsDWQFGseLCRFVTAAF 100
CAG05265      94 VLMPSFYALVCLISVPINISALLAFSRRIRpkkPAAIYMLNLASADLLFALLLPFKISYHFsgnNWIFGeaLCRVVTAAF 173 Tetraodon nigro...
NP_001108318  92 AVIPTIYIIVFIISAPLNLLALVMFARKVRpkkPAAIYMMNLACADLLFVLLLPFRIAYNYngnNWIYGagMCRVVTAAF 171 zebrafish
XP_424799     99 RFVPSVYTVVVVLSLPLNITAIFVFLKKMKiekPAVVYMLNLALADVLFVSVLPFKIAYHFsgnNWVFGprMCRFVTAAF 178 chicken
P47749       102 KFVPSLYTVVFIVGLPLNLLAIIIFLFKMKvrkPAVVYMLNLAIADVFFVSVLPFKIAYHLsgnDWLFGpgMCRIVTAIF 181 African clawed ...
NP_001096094  95 RFMPSFYIIIILISLPLNALALVTFTCRIRekkPAVIYMSHLACVDLLFALLLPLKIHYQLnasDWLFGeaACRVLTAAY 174 zebrafish
P25116       103 LFVPSVYTGVFVVSLPLNIMAIVVFILKMKvkkPAVVYMLHLATADVLFVSVLPFKISYYFsgsDWQFGseLCRFVTAAF 182 human
Feature 1        #  #                                            # #####                ####     
3VW7_A       101 YCNMYASILLMTVISIDRFLAVVYPmqSLSWRtlGRASFTCLAIWALAIAGVVPLLLkEQTIQVPGLgiTTCHDVLsetl 180
CAG05265     174 YWNMYCSVLLIACISVDRLLAVVYPidSLAWRrpRNATIACASMWVLSLAGSLPLVLsEQSLYVSELkiTTCHDVQssq- 252 Tetraodon nigro...
NP_001108318 172 YCNMYCSVLLIMCISVDRFLAVVYPmdSLTWRspQTATVTCAAMWLLSVGGVTPLLIsNQTIHLPDLgiTTCHDVLdiql 251 zebrafish
XP_424799    179 YCNMYCSIMLMTSISFDRFLAVVYPmqALGWRtlTRASVICFIIWFVAISGVVPFLVrEQAMEIPKLniTTCHDVLrese 258 chicken
P47749       182 YCNMYCSVLLIASISVDRFLAVVYPmhSLSWRtmSRAYMACSFIWLISIASTIPLLVtEQTQKIPRLdiTTCHDVLdlkd 261 African clawed ...
NP_001096094 175 YCYMYCSILLMMCMSVDRLLGVALPiaSLTWRnaRKASFICTLVWLLSLTGTVPLLLmRQTVRIKDVg-ITCHDMLnand 253 zebrafish
P25116       183 YCNMYASILLMTVISIDRFLAVVYPmqSLSWRtlGRASFTCLAIWALAIAGVVPLLLkEQTIQVPGLniTTCHDVLnetl 262 human
Feature 1             #  ### ### ##                                                              
3VW7_A       181 -legYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLsssanifemlrideglrlkiykntegyytigighlltkspslna 259
CAG05265     253 -lmwEYKLYFLLLSCLLFFLPLLITVVSYGKVIWSLsrvhcg-------------------------------------- 293 Tetraodon nigro...
NP_001108318 252 -lreYYLYFFPIFCSLFFFIPLIFSTVCYLRIIQALcaan---------------------------------------- 290 zebrafish
XP_424799    259 -lhsYYVYFFSVFSSVFFVVPFIITTICYVCIIRCLsssti--------------------------------------- 298 chicken
P47749       262 -lkdFYIYYFSSFCLLFFFVPFIITTICYIGIIRSLssss---------------------------------------- 300 African clawed ...
NP_001096094 254 ktmlYYVYLFSILSCLYFFVPLVITLVSYSTIIYVLsvksdr-------------------------------------- 295 zebrafish
P25116       263 -legYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLsssa---------------------------------------- 301 human
Feature 1                                                                                        
3VW7_A       260 akseldkaigrntngvitkdeaeklfnqdvdaavrgilrnaklkpvydsldavrraalinmvfqmgetgvagftnslrml 339
CAG05265         --------------------------------------------------------------------------------     Tetraodon nigro...
NP_001108318     --------------------------------------------------------------------------------     zebrafish
XP_424799        --------------------------------------------------------------------------------     chicken
P47749           --------------------------------------------------------------------------------     African clawed ...
NP_001096094     --------------------------------------------------------------------------------     zebrafish
P25116           --------------------------------------------------------------------------------     human
Feature 1                                                                       #  ## ##  #      
3VW7_A       340 qqkrwdeaavnlaksrwynqtpnrakrvittfrtgtwdayanrSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYsflsh 419
CAG05265     294 --------------------------------------vpgcsRRRTRAMVMALTVLVIFVLCFMPTNCLLLAHYlqfhq 335 Tetraodon nigro...
NP_001108318 291 ---------------------------------------venrAKKTRAVIMAVTVFAVFVICFTPTNIILLSHYvrfay 331 zebrafish
XP_424799    299 ---------------------------------------varqNKKTRALLLCVAVFSVFVICFGPTNVLLLIHYihfsy 339 chicken
P47749       301 ---------------------------------------iensCKKTRALFLAVVVLCVFIICFGPTNVLFLTHYlqea- 340 African clawed ...
NP_001096094 296 --------------------------------------issssSNRTRAVIMTISVLSEFVVCFAPTNGILLYHCvrlar 337 zebrafish
P25116       302 ---------------------------------------vanrSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYsflsh 342 human
Feature 1                   ## ###  #  ##                     
3VW7_A       420 t-----stteaAYFAYLLCVCVSSISCCIDPLIYYYASseCQRYV 459
CAG05265     336 gvtttqeapdgSYAMYLVFLCVGSLNCLLDPLVYYFGSsqCQKQL 380 Tetraodon nigroviridis
NP_001108318 332 ------khndaSYAAYLVSMCMGSISCCLDPLIYYFGSsqCQKQV 370 zebrafish
XP_424799    340 n-----nsleyLYFAYVLCVCISSVSCCIDPFIYYYASsqYQRQL 379 chicken
P47749       341 --------nefLYFAYILSACVGSVSCCLDPLIYYYASsqCQRYL 377 African clawed frog
NP_001096094 338 rg--ksgegdsSYSAYMLAVCLGSASVFLDPLLYYYGSshYRKII 380 zebrafish
P25116       343 t-----stteaAYFAYLLCVCVSSISCCIDPLIYYYASseCQRYV 382 human

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