4PHU


Conserved Protein Domain Family
7tmA_FFAR

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cd14983: 7tmA_FFAR 
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free fatty acid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors
This subfamily includes the free fatty acid receptors (FFARs) which bind free fatty acids (FFAs). They belong to the class A G-protein coupled receptors and are composed of three members, each encoded by a separate gene (FFAR1, FFAR2, and FFAR3). These genes and a fourth pseudogene, GPR42, are localized together on chromosome 19. FFAR1 is a receptor for medium- and long-chain FFAs, whereas FFAR2 and FFAR3 are receptors for short chain FFAs (SCFAs), which have different ligand affinities. FFAR1 directly mediates FFA stimulation of glucose-stimulated insulin secretion and also indirectly increases insulin secretion by enhancing the release of incretin. FFAR2 activation by SCFA suppresses adipose insulin signaling, which leads to the inhibition of fat accumulation in adipose tissue. FAAR3 is expressed in intestinal L cells, which produces glucagon-like peptide 1 (GLP-1) and peptide YY (PYY), suggesting that this receptor may be involved in energy homeostasis. FFARs are considered important components of the body's nutrient sensing mechanism, and therefore, these receptors are potential therapeutic targets for the treatment of metabolic disorders, such as type 2 diabetes and obesity.
Statistics
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PSSM-Id: 320114
Aligned: 6 rows
Threshold Bit Score: 300.504
Created: 29-Sep-2008
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:putative ligand binding pocket [chemical binding site]
Evidence:
  • Structure:4PHU: Human GPR40 (FFAR1) binds allosteric agonist TAK-875, contacts at 4A
  • Comment:based on the structures of some class A family members with bound ligands (peptides or chemicals), agonists, or antagonists
  • Comment:Small-molecule chemical ligands tend to bind deeper within the receptor core, compared to a peptide ligand neurotensin, which binds towards the extracellular surface of its receptor.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                 #  ##            ######
4PHU_A        19 QLSFGLYVAAFALGFPLNVLAIRGATAHARlr-ltPSAVYALNLGCSDLLLTVSLPLKAVEALasgaWPLPaslCPVFAV 97 
O15552         8 SLILMAYIIIFLTGLPANLLALRAFVGRIRqpqpaPVHILLLSLTLADLLLLLLLPFKIIEAAsnfrWYLPkvvCALTSF 87  human
EMP24791       6 TLALAVYFVTILLGLPANTLALYIFYRRARar-ltPNLIYMINLCLSDLAFILILPLKILEVVpp-gWSPAnflCSLYSL 83  green sea turtle
XP_006011340   4 ILYLMVYCSTIALGLPSNLLALYALYNTARnk-mtPNVIYMMNLCISDLVFIMMLPIKILETIet-qWILPavfCPVYNL 81  coelacanth
XP_002938260   5 NLLLAVYVLTIFLGLPSNIMVLYLFFKEARsr-ltPNLIYMINLCVSDLVFIMVLPIKIIEIFss-tWTLPqilCPLYNL 82  western clawed ...
XP_006641709  11 YLFLTVYSLTLLLGLPSNILVLAAFVNKARtegttPNVVYVINLCLANLVFVLWLPIKIVETLk--sWTLPallCPIYNF 88  spotted gar
Feature 1         ##  #                                            # #####                       
4PHU_A        98 AHFAPLYAGGGFLAALSAARYLGAAFPlgYQAFRRpCYSWGVCAAIWALVLCHLGLVFGleapggwldhsntslgintpv 177
O15552        88 GFYSSIYCSTWLLAGISIERYLGVAFPvqYKLSRRpLYGVIAALVAWVMSFGHCTIVIIvqylntte---------qvrs 158 human
EMP24791      84 AHFGTLYASTCFLTAVSAGRYLGTTFPirYQLYKKpLYSCLVCVAIWILVGFHGVLLLIletslgan--------atlft 155 green sea turtle
XP_006011340  82 LHFSTLYASTTFLTAISAGRYLSVAFPikYQLRKKpKYSCWICAILWLLVVVHVTLVFLlenivitsnnstgityfistm 161 coelacanth
XP_002938260  83 IHFSTIYASVCFLSAVSVGRYLSTAFPikYNIYKKpRYSCLVCVILWVIVIFHMAFVFLvetsqngsia-----lfltnh 157 western clawed ...
XP_006641709  89 FHFSTIYASTLFLTSISVGRYLSIAFPisYKLYKKaKNSCFVCVFFWAIVITHVALVLTvqendedlf-------isssa 161 spotted gar
Feature 1                         #  ### ### ##                                                  
4PHU_A       178 ngsPVCLEAWdp---asAGPARFSLSLLLFFLPLAITAFCFVGCLRAlargsnifemlrideglrlkiykdtegyytigi 254
O15552       159 gneITCYENFtdnqldvVLPVRLELCLVLFFIPMAVTIFCYWRFVWImlsqp---------------------------- 210 human
EMP24791     156 gngSTCYQEFspeqlalLAPVRLELSVALFFLPLAITVFCYASCIHVlvks----------------------------- 206 green sea turtle
XP_006011340 162 gnsSVCYDNFteqqldlLAPVRLEISIVLFFLPLILTAFCYLRCIRIlirt----------------------------- 212 coelacanth
XP_002938260 158 dntWLCYENFtseqlalVVPVRFEISIVLYFFPLAITLFCYVSCIRIlmrs----------------------------- 208 western clawed ...
XP_006641709 162 dntSTCYNNFtkeqldfLAPLRLEMAVVLFFIPLLVTSFCYFRCIALvvrs----------------------------- 212 spotted gar
Feature 1                                                                                        
4PHU_A       255 ghlltkspslnaakseldkaigrntngvitkdeaeklfnqdvdaavrgilrnaklkpvydsldavrraalinmvfqmget 334
O15552           --------------------------------------------------------------------------------     human
EMP24791         --------------------------------------------------------------------------------     green sea turtle
XP_006011340     --------------------------------------------------------------------------------     coelacanth
XP_002938260     --------------------------------------------------------------------------------     western clawed ...
XP_006641709     --------------------------------------------------------------------------------     spotted gar
Feature 1                                                                                     #  
4PHU_A       335 gvagftnslrmlqqkrwdeaavnlaksrwynqtpnrakrvittfrtgtwdaygslthRRKLRAAWVAGGALLTLLLCVGP 414
O15552       211 -----------------------------------------------------lvgaQRRRRAVGLAVVTLLNFLVCFGP 237 human
EMP24791     207 -----------------------------------------------------rlheQKKRRAVRLAMAPLSIFVLCFGP 233 green sea turtle
XP_006011340 213 -----------------------------------------------------klseRKKKRAIALAMSTLATFVMCFAP 239 coelacanth
XP_002938260 209 -----------------------------------------------------rmhvNLKRKAMRVAVTTLVVFIVCFAP 235 western clawed ...
XP_006641709 213 -----------------------------------------------------clhtRRKRRVIRVAVSTLIVFVVCFAP 239 spotted gar
Feature 1        ## ##  #      ## ###  #  ##                       
4PHU_A       415 YNASNVASFlypnlGGSWRKLGLITGAWSVVLNPLVTGYLGRGPGLKTVC 464
O15552       238 YNVSHLVGYhq-rkSPWWRSIAVVFSSLNASLDPLLFYFSSSVVRRAFGR 286 human
EMP24791     234 YNLSHVVGYar-seDVWWRRVALLPGACNAFLDPLIFYFLSSAKDYGLAW 282 green sea turtle
XP_006011340 240 YNISHVVGFvl-hqNLWWRKLALLCTTCNAFLDPFIFFFLSSTMERTFHQ 288 coelacanth
XP_002938260 236 YNISHVVGFvi-heSVWWRKWALLPSTCNAFLDPLIFYFISSSMDQGFYH 284 western clawed frog
XP_006641709 240 YNFSHVVGFir-heNVEWRGEALLTSTCNVFLEPIIMFFLSSSTEHRLNH 288 spotted gar

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