Conserved Protein Domain Family
NHL_like_5

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cd14963: NHL_like_5 
Uncharacterized NHL-repeat domain in bacterial proteins
The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.
Statistics
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PSSM-Id: 271333
Aligned: 17 rows
Threshold Bit Score: 294.969
Created: 27-Mar-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:NHL repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    ####### ######################  ########                            
AHF07187      61 IYGDLSAp-LNKPMAVAVS-NRTIYISDTNNQRIQVFDYEGKpiSMFGEPGEgeg-----------qfRFPYGIASDa-Q 126 Desulfitobacter...
YP_003639789  60 LFSIYEPgvMSRPLGVAVSeWGDVFVADSANHRVAVFDANGAfkAVLGKQGAgpg-----------efNYPTGIAVY--G 126 Thermincola pot...
YP_359094     68 IYGTDQNp-FKKPMAVAVS-GNRIYVTDTGNQRVQVFDYDGNplFTFGKPGTdkg-----------qfKFPYGIAVDg-D 133 Carboxydothermu...
WP_008515590  66 MYGPFGDs-MDKPMDVTVV-GRQIYVSDTGNSKIRVFDYNGNhvNSFGERGTepg-----------qlRFPYGIAENs-Q 131 Dethiobacter al...
YP_003638913  57 GKGLLPA--FNKPMSVATDkDNNIYVTDSGNNRVVVFNRRGEfmYEFGERGValpapgykatwspgkfNYPYGIDIDeeT 134 Thermincola pot...
YP_003641598  59 LLSVYDPkrLKRPLGVAVNsWGDIYIADSANHRLVVFDQNGRfkKTLGGPGTgeg-----------rfYYPAGVAVS--G 125 Thermincola pot...
YP_003640180  51 YYGPQEDp-FSWPVGIAVH-KGQIYIADANRHRIRIFTPEWRlvKNIGHYGKkkg-----------elGYPVGVAVNs-E 116 Thermincola pot...
YP_003639886  64 IYGPENGr-LNKIWNTFVA-DDRIYVVDAGNQRIAIFDYSGKfiSEVGRPKKgvpisr-----qpgvlQAPSGITVV--N 134 Thermincola pot...
WP_008516209  70 ILGEGENm-LHKPMGVLVS-SGQVYVTDTMNKRVQVFSLSGNprFAFGESGNkpg-----------efSFPYGIEKTs-N 135 Dethiobacter al...
YP_003640182  53 VVSTSGKyrLNRPMGITVDkEGRIFVADSGNNRVVVYKLGSWfkKIIGGPDGk--------------mKTPTSVALY--K 116 Thermincola pot...
Feature 1                                                                                        
AHF07187     127 GQLYIADLYNGNISIFSPDGQFIKYFGEKGEFk------gPGGLAIDG-DKLYVSDvqSSEIKVFSLDG-TKLLSFGKkg 198 Desulfitobacter...
YP_003639789 127 RKIYVADFYNRRVQVLNFDGKQLSVLPRGKDLrelggnifPVTVAVDRsGNVYVSDvsQHRIVVFDDSG-RFVRYFGRag 205 Thermincola pot...
YP_359094    134 GKVYVADMYNGKISVFNSEGIFQYYFGNPSDIs------rPAGLFISG-NRLYVADvgKNKVTAFTLDG-KKVLEFGKmg 205 Carboxydothermu...
WP_008515590 132 GQILVADMYNGNISVFTPDGTFLHYFGASVDLe------sPAGLAIID-GRVYVTDvaQHKVIVFDEEG-EKIFEFGEeg 203 Dethiobacter al...
YP_003638913 135 GNIFVADLANQRIQVFDRKGKFIDWFPKGPYGgtat-difPLALDVKD-GKVYIAN--PFQVVIFTTKG-KFVKDFGMpg 209 Thermincola pot...
YP_003641598 126 NKVYVADFYNQRVQVLDQDGNFLAVLPSPRDRnklgpvimPITVATDSkGNLYVSDlsKQRILVFDEKG-SFQYSFGKgg 204 Thermincola pot...
YP_003640180 117 GEIFVSEVVNNRIQVFSAEGAFKSFFPQRKVDik-----sPTAIAIDKsDNVLVFDrgDHFIKVFDRTG-KLLFKFGGpg 190 Thermincola pot...
YP_003639886 135 GEIYVTDTSTRLIHVFNSEGKFLRYFAEKKPKv-------PVNIFYKD-GKFYVLDngTMTVQVYDQTG-KSLLVFGKqg 205 Thermincola pot...
WP_008516209 136 GEIFVADVYNGNISVFDDRGNFLRYFAPQEKElt-----qPAGLFIHE-TSLYVSNldPGQILVFDLETgELLRKIGSeg 209 Dethiobacter al...
YP_003640182 117 NRLYVGSYGTGEIQVYDKSGELKDSLPHQKDRlnlp-dirTLALTVDSqGNLYASDakRQQIAVFDQEG-NLKLIFGRpg 194 Thermincola pot...
Feature 1                                                                                        
AHF07187     199 agdgeLNSPNALVHAG---NKIYVSDTGNDRIQVFDEQGn-FLLKASSL--------------LSNPRGISVDPQGn-IY 259 Desulfitobacter...
YP_003639789 206 snpgeLSYVNGIAVNEd-aGEIYLANSNNGRIDTFDLNGryLPDRISGKg-------------AANPKGVAFEETSgnLY 271 Thermincola pot...
YP_359094    206 tangeFRAPNCVWVAN---GKIYVADSGNDRVQVFNLLGg-YAYTLTGGnnng------etfsFINPRGVGVDGRGv-LY 274 Carboxydothermu...
WP_008515590 204 depgqFLSPNAITVSG---TYVAVSDTGNHRIQIFNRMGn-FIDEITHAdg----------rnFVNPRGVGYTSRGe-LL 268 Dethiobacter al...
YP_003638913 210 keegqFDRPNGIAVGDd--GTIYVSDSNNLRVQALDQNG--KVKWVYGKpvdawdnfnkkpqqFELPRNIAVGPDGn-IY 284 Thermincola pot...
YP_003641598 205 sgrgeLSYVNGIAVDDagkGRIYLANSNNGRIDVYSMKGe-YISTLAGSk------------sLLNPKGIAFDRDSgnLL 271 Thermincola pot...
YP_003640180 191 sspgqLKFAMGIAVLPn--GNICVSDSGNRRIQFFDKQGk-FLAQFAGGtdg--------lngFALPRGIAAINNEk-VA 258 Thermincola pot...
YP_003639886 206 dkpgeFYYPYSVYVDNn--NEIYVADSNNNRIQIFDAKGk-FKKELKGEding-------sggYSVPRGIAFDSKGn-LY 274 Thermincola pot...
WP_008516209 210 dglgqLMFPNDAVIGPd--GNLYVSDTGNNRIQVYTINGe-FIETLNNEp-------------LFSPRGIIFGPRGq-LY 272 Dethiobacter al...
YP_003640182 195 yfpgeLSYVNGLAVDEe-nRRIIALDSNNLRLLYFNFEGk-FLDYLQLDkia--------kelFVAPRGLAYDPEKkaIY 264 Thermincola pot...
Feature 1                                                                       
AHF07187     260 VVSNLTNKVVVFKPNGek--lTTIGQMGSDdg--qFRFPNGLTRDNqGRLYITDVgNTRTAIF 318 Desulfitobacterium metallireduce...
YP_003639789 272 VADTLAHKIHVLDKQGne--iETIGQRGLDig--qFNFPTAVAVDNrGRIYVADReNNRIQVF 330 Thermincola potens JR
YP_359094    275 VVDNLNSRVCGFDEQGnf--lFTFGSKGAEln--qFILPNGLFVDDqGRIYITDTvNQRVVVY 333 Carboxydothermus hydrogenoforman...
WP_008515590 269 TVNNMTHQTYIFNPNGef--qHILGQQGQGpg--eNFLPNGLYIDDqGRIYITDTsNRRVNVY 327 Dethiobacter alkaliphilus
YP_003638913 285 VIDAFDFNIKVLSPQGkl--lAEMGQRGVDdg--tFNFPNGIAITKdKVIYVADKeNDRVQAI 343 Thermincola potens JR
YP_003641598 272 VADTFAHRIAVFNEEGnv--vQTVGTRGIEpg--gFNFPTAVTVDDeGRMYVADReNNRVEVY 330 Thermincola potens JR
YP_003640180 259 VVDALARRVLEISRKKd---aWESKILGKD-----FVVPDGAFYAD-GRLYVADRgDNSVAVI 312 Thermincola potens JR
YP_003639886 275 TAETMSNDISIANKEGkvlsrFSYAEPETEttvdaLKAPTSVFIDDnQRLYVTELaNSRILVY 337 Thermincola potens JR
WP_008516209 273 VATKITNDITVLDETG-----RVTERFGQDl----FELPNGIALDDnGFLYVTDY-LSVSIFD 325 Dethiobacter alkaliphilus
YP_003640182 265 IADTLSDNVVILSEQG-----KILDKSGKIg----LSYPHGLFLGPdKFLYITNReNSDIYLL 318 Thermincola potens JR

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