4QBD


Conserved Protein Domain Family
MYSc_Myh1_insects_crustaceans

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cd14909: MYSc_Myh1_insects_crustaceans 
Click on image for an interactive view with Cn3D
class II myosin heavy chain 1, motor domain
Myosin motor domain of type IIx skeletal muscle myosin heavy chain 1 (also called MYHSA1, MYHa, MyHC-2X/D, MGC133384) in insects and crustaceans. Myh1 is a type I skeletal muscle myosin that in Humans is encoded by the MYH1 gene. Class II myosins, also called conventional myosins, are the myosin type responsible for producing actomyosin contraction in metazoan muscle and non-muscle cells. Myosin II contains two heavy chains made up of the head (N-terminal) and tail (C-terminal) domains with a coiled-coil morphology that holds the two heavy chains together. The intermediate neck domain is the region creating the angle between the head and tail. It also contains 4 light chains which bind the heavy chains in the "neck" region between the head and tail. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. Class-II myosins are regulated by phosphorylation of the myosin light chain or by binding of Ca2+. A cyclical interaction between myosin and actin provides the driving force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. CyMoBase classifications were used to confirm and identify the myosins in this hierarchy.
Statistics
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PSSM-Id: 276874
Aligned: 37 rows
Threshold Bit Score: 1222
Created: 8-Jan-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
  next features
Conserved site includes 34 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    #########                                           #
4QBD_A        113 PCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITG 192  fruit fly
XP_008179213  101 ASVLYNLKERYYHKLIYTYSGLFCVAINPYKRFPVYTNRCAKLYRGKRRNEVPPHIFAISDGAYVNMLTNKENQSMLITG 180  pea aphid
EFN74640      149 ASVLHNLKQRYYAQLIYTYSGLFCVAINPYKRFPVYTHRCAKLYRGKRRNEVPPHIFAISDGAYVNMLTNSENQSMLITG 228  Camponotus fl...
EFN88457      149 ASVLHNLKQRYYAKLIYTYSGLFCVAINPYKRFPVYTSRCAKLYRGKRRSEVPPHIFAISDGAYVNMLTNSENQSMLITG 228  Harpegnathos ...
BAG30740      101 ASVLYNLKQRYYHKLIYTYSGLFCVAINPYKRFPVYTTRCARLYRGKRRSEVPPHIFAISDGAYVNMLTNHENQSMLITG 180  Papilio xuthus
EEB11219      101 ASVLYNLKQRYYHKLIYTYSGLFCVAINPYKRYPVYTNRCAKIYRGKRRSEVPPHIFAISDGAYVNMLTNRENQSMLITG 180  human body louse
XP_008179221  101 ASVLYNLKERYYHKLIYTYSGLFCVAINPYKRFPVYTNRCAKLYRGKRRNEVPPHIFAISDGAYVNMLTNKENQSMLITG 180  pea aphid
EAT42758      101 AAVLHNLRQRYYSKLIYTYSGLFCVVINPYKRWPLYTLRVAKMYRGKRRNEVPPHLFAVSDGAYVNMLTNHENQSMLITG 180  yellow fever ...
AHF46691      101 ASVLHNLRERYRARLIYTYSGLFCIVINPYKRWPLYTLRVAKMYRGKRRNEIPPHLFAVSDGAYVNMLTNKENQSMLITG 180  yellow fever ...
EDS44957      101 ASVLHNLRERYRAQLIYTYSGLFCIVINPYKRWPLYTMRAAKMYRGKRRNEVPPHLFAVSDGAYVNMLSNKENQSMLITG 180  southern hous...
Feature 1         #######                                                 ###########             
4QBD_A        193 ESGAGKTENTKKVIAYFATVGASKKTDEaa----kSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTG 268  fruit fly
XP_008179213  181 ESGAGKTENTKKVIAYFATVGASTKKEEeaaggvkKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSG 260  pea aphid
EFN74640      229 ESGAGKTENTKKVIAYFATVGASSKKEKeep--gkKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSG 306  Camponotus fl...
EFN88457      229 ESGAGKTENTKKVIAYFATVGASTKKQEdt---nqKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSG 305  Harpegnathos ...
BAG30740      181 ESGAGKTENTKKVIAYFATVGASQKKDPsq----eKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSG 256  Papilio xuthus
EEB11219      181 ESGAGKTENTKKVIAYFATVGASTSKKDeg----sKKGNLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSG 256  human body louse
XP_008179221  181 ESGAGKTENTKKVIAYFATVGASTKKEEeaaggvkKKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPSG 260  pea aphid
EAT42758      181 ESGAGKTENTKKVIAYFATIGASTKKEEss----eKKASLEDQVVQTNPVLEAYGNAKTVRNDNSSRFGKFIRIHFTGSG 256  yellow fever ...
AHF46691      181 ESGAGKTENTKKVIAYFATIGASKKDTE-------GKPSLEDQVVQTNPVLEAYGNAKTVRNDNSSRFGKFIRIHFTASG 253  yellow fever ...
EDS44957      181 ESGAGKTENTKKVIAYFATIGASSKKSAee----eKKISLEDQVVQTNPVLEAYGNAKTVRNDNSSRFGKFIRIHFTASG 256  southern hous...
Feature 1                                                                                         
4QBD_A        269 KLAGADIETYLLEKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQGKVTVAs-------------- 334  fruit fly
XP_008179213  261 KLAGADIETYLLEKARVISQQSLERSYHIFYQIMSGSVKGVKEMCMLSEDIHDYYYVSQGKTTIPn-------------- 326  pea aphid
EFN74640      307 KLAGADIETYLLEKARVISQQSLERSYHIFYQMMSGSVKGLKEMCLLTNNIHDYHFVSQGKTTIPglddgeellvtdvkn 386  Camponotus fl...
EFN88457      306 KLAGADIETYLLEKARVISQQTLERSYHIFYQMMSGSVKGLKEMCLLSNNIQDYYFVSQGKTTIPg-------------- 371  Harpegnathos ...
BAG30740      257 KLAGADIETYLLEKARVISQQALERSYHIFYQMMSGSVAGLKDMCLLSNDVYDYHIVSQGKTTIPn-------------- 322  Papilio xuthus
EEB11219      257 KLAGADIETYLLEKARVISQQSLERSYHIFYQMMSGAVPGLKAMCLLSDNIQDYYFVSQGKTTIPn-------------- 322  human body louse
XP_008179221  261 KLAGADIETYLLEKARVISQQSLERSYHIFYQIMSGSVKGVKEMCMLSEDIHDYYYVSQGKTTIPn-------------- 326  pea aphid
EAT42758      257 KLAGADIETYLLEKARVISQQSLERSYHIFYQMMSGSVKGLKDMCFLSNDIYDYYNVAQGKITIPn-------------- 322  yellow fever ...
AHF46691      254 KLAGADIETYLLEKARVISQQTLERSYHIFYQMMSGSVKGLKEMCFLSNDIYDYVNVSQGKITIPn-------------- 319  yellow fever ...
EDS44957      257 KLGGADIETYLLEKARVISQQTLERSYHIFYQMMAGSVKGLKEMCYLSNDIYDYYNVSQGKVTIPn-------------- 322  southern hous...
Feature 1                                                                                         
4QBD_A        335 ----------------------IDDAEEFSLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEE 392  fruit fly
XP_008179213  327 ----------------------MDDGEEFQLTDQAFDVLGFTEEEKNDIYKITASVMHMGGMKFKQRGREEQAEADGTDE 384  pea aphid
EFN74640      387 cllseniydyynvsqgkitipnVDDGEECLLTDQAFDVLGFTQEEKDNIYKITAAVMHMGGMKFKQRGREEQAEADGTEE 466  Camponotus fl...
EFN88457      372 ----------------------LDDGEELLITDQAFDVLGFTQEEKDNIYKITAAVMHMGGMKFKQRGREEQAEADGTEE 429  Harpegnathos ...
BAG30740      323 ----------------------VDDGEECLLTDQAFDILGFTQEEKDNVYKITAAVMHMGCMKFKQRGREEQAEADGTED 380  Papilio xuthus
EEB11219      323 ----------------------VDDGEELILTDQAFDVLGFTQEEKNDIYKITAAVMHMGGMKFKQRGREEQAEADGTEE 380  human body louse
XP_008179221  327 ----------------------MDDGEEFQLTDQAFDVLGFTEEEKNDIYKITASVMHMGGMKFKQRGREEQAEADGTDE 384  pea aphid
EAT42758      323 ----------------------VDDGEECLLTDEAFNVLGFTQEEKDNIYKITAAVMHMGGMKFKQKGREEQAEADGMEE 380  yellow fever ...
AHF46691      320 ----------------------VDDGEECMLTDVAFDVLGFTQDEKDNIYKITAAVMHMGGMKFKQKGREEQAEADGTDE 377  yellow fever ...
EDS44957      323 ----------------------VDDGEECALTDEAFNILGFTQEEKDNIYKITAAVMHMGGMKFKQKGREEQAEADGTDE 380  southern hous...
Feature 1                                                                                         
4QBD_A        393 GGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETLDTQQKRQHFIGVL 472  fruit fly
XP_008179213  385 GARVAKLLGVDCDDLYKNLLKPRIKVGNEFVTQGRNKDQVAYSVGAMSKGMFDRLFKFMVKKCNETLDTQQKRQHFIGVL 464  pea aphid
EFN74640      467 GDRVAKLLGCDCADLYKNLLKPRIKVGNEFVTQGRNKDQVAYSVGAMSKAMFDRLFKWLVKKCNETLDTKQKRQHFIGVL 546  Camponotus fl...
EFN88457      430 GERVAKLLGCDCADLYKNLLKPRIKVGNEFVTQGRNKDQVAYSVGAMSKAMFDRLFKWLVKKCNETLDTKQKRQHFIGVL 509  Harpegnathos ...
BAG30740      381 GDKVAKLLGVDCQDLYKNLLKPRIKVGNEFVTQGRNKDQVTNSVGALCKGMFDRLFKWLVKKCNETLDTKQKRQHFIGVL 460  Papilio xuthus
EEB11219      381 GDRVAKLLGVQTDELYKNLLKPRIKVGNEFVTQGRNKDQVSYSVGAMSKAMFDRLFKWLVKKCNETLDTKQKRQHFIGVL 460  human body louse
XP_008179221  385 GARVAKLLGVDCDDLYKNLLKPRIKVGNEFVTQGRNKDQVAYSVGAMSKGMFDRLFKFMVKKCNETLDTQQKRQHFIGVL 464  pea aphid
EAT42758      381 GDRVAKLLGCVTEDLYKNLLKPRIKVGAEFVTKGQNKDQVTNAVGALCKGIFDRLFKWLVKKCNETLDTQMKRVQFIGVL 460  yellow fever ...
AHF46691      378 GDRVAKLLGCVTDDLYKNLLKPRIKVGTEYVTKGQNKDQVSNAVGALCKGIFDRLFKWLVKKCNETLDTKQKRAQFIGVL 457  yellow fever ...
EDS44957      381 GDRVAKLLGCVTEDLYKNLLKPRIKVGAEFVVKGQNKDQVTNSVGALCKGIFDRLFKWLVKKCNETLDTKQKRAQFIGVL 460  southern hous...
Feature 1         ######                                                                          
4QBD_A        473 DIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYK-------------------------------------- 514  fruit fly
XP_008179213  465 DIAGFEIFDFNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYK-------------------------------------- 506  pea aphid
EFN74640      547 DIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKkegivwqfidfgmdllacieliekfnsfeqlcinftne 626  Camponotus fl...
EFN88457      510 DIAGFEIFDFNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKkegivwqfidfgmdllacieliekfnsfeqlcinftne 589  Harpegnathos ...
BAG30740      461 DIAGFEIFDFNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYT-------------------------------------- 502  Papilio xuthus
EEB11219      461 DIAGFEIFDFNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYQ-------------------------------------- 502  human body louse
XP_008179221  465 DIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYQ-------------------------------------- 506  pea aphid
EAT42758      461 DIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYK-------------------------------------- 502  yellow fever ...
AHF46691      458 DIAGFEIFDFNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYK-------------------------------------- 499  yellow fever ...
EDS44957      461 DIAGFEIFDYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYK-------------------------------------- 502  southern hous...
Feature 1                                                                                         
4QBD_A        515 -------------------REGIDWAFIDFGMDLLACIDLIEK------------------------------------- 538  fruit fly
XP_008179213  507 -------------------REGIEWTFIDFGMDLQQCIDLIEK------------------------------------- 530  pea aphid
EFN74640      627 klqqffnhhmfvleqeeytKEGIEWAFIDFGMDLLACIDLIEKfngfeqlcinftneklqqffnhhmfvleq-------- 698  Camponotus fl...
EFN88457      590 klqqffnhhmfvleqeeytREGIEWAFIDFGMDLLACIDLIEKyngfeqlcinftneklqqffnhhmfvleqeeykkegi 669  Harpegnathos ...
BAG30740      503 -------------------REGIHWAFIDFGMDLLACIDLIEK------------------------------------- 526  Papilio xuthus
EEB11219      503 -------------------REGIQWAFIDFGMDLLACIELIEK------------------------------------- 526  human body louse
XP_008179221  507 -------------------REGIEWAFIDFGMDLAACIELIEK------------------------------------- 530  pea aphid
EAT42758      503 -------------------KEGINWAFIDFGMDLLACIDLIEK------------------------------------- 526  yellow fever ...
AHF46691      500 -------------------KEGINWAFIDFGMDLLACVELIEK------------------------------------- 523  yellow fever ...
EDS44957      503 -------------------KEGIVWAFIDFGMDLLACIELIER------------------------------------- 526  southern hous...
Feature 1                                                                                         
4QBD_A            --------------------------------------------------------------------------------      fruit fly
XP_008179213      --------------------------------------------------------------------------------      pea aphid
EFN74640          --------------------------------------------------------------------------------      Camponotus fl...
EFN88457      670 dwvfidfgmdllacidliekfnsfeqlcinftneklqqffnhhmfileqeeykregiewtfidfgmdlqqtidliekfns 749  Harpegnathos ...
BAG30740          --------------------------------------------------------------------------------      Papilio xuthus
EEB11219          --------------------------------------------------------------------------------      human body louse
XP_008179221      --------------------------------------------------------------------------------      pea aphid
EAT42758          --------------------------------------------------------------------------------      yellow fever ...
AHF46691          --------------------------------------------------------------------------------      yellow fever ...
EDS44957          --------------------------------------------------------------------------------      southern hous...
Feature 1                                                                                         
4QBD_A        539 ------------------------------------------------------PMGILSILEEESMFPKATDQTFSEKL 564  fruit fly
XP_008179213  531 ------------------------------------------------------PMGILSILEEESMFPKATDKTFEDKL 556  pea aphid
EFN74640      699 --------------------------eeykkegidwvfidfgmdllacieliekPMGILSILEEESMFPKATDKTFEEKL 752  Camponotus fl...
EFN88457      750 feqlcinftneklqqyfnhymfvleqeeyeregiewtfidfgldlqptitliekPMGILSILEEESMFPKATDKTFEEKL 829  Harpegnathos ...
BAG30740      527 ------------------------------------------------------PMGILSILEEESMFPKATDQTFVEKL 552  Papilio xuthus
EEB11219      527 ------------------------------------------------------PMGILSILEEESMFPKATDKTFEDKL 552  human body louse
XP_008179221  531 ------------------------------------------------------PMGILSILEEESMFPKATDKTFEDKL 556  pea aphid
EAT42758      527 ------------------------------------------------------PMGILSILEEESMFPKATDQTFAEKL 552  yellow fever ...
AHF46691      524 ------------------------------------------------------PMGILSILEEESMFPKATDQTFVEKL 549  yellow fever ...
EDS44957      527 ------------------------------------------------------PMGILSILEEESMFPKATDQTFAEKL 552  southern hous...
Feature 1                                                                                         
4QBD_A        565 TNTHLGKSapfqKPKPPKPGQQAAHFAIAHYAGCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFADHAGqsggg 644  fruit fly
XP_008179213  557 TSNHLGKSpnfrKPAPPKPGCQAGHFALAHYAGVVSYNITGWLEKNKDPLNDTVVDQFKKGTNKLLVEIFADHPGqsggq 636  pea aphid
EFN74640      753 NNNHLGKSpnflKPKPPKPGQVAAHFAIGHYAGNVPYNITGWLEKNKDPLNDTVVDQFKKSTNKLLIEIFADHPGqsgda 832  Camponotus fl...
EFN88457      830 NNNHLGKSpnylKPKPPKPGQQAAHFAIGHYAGNVPYNITGWLEKNKDPLNDTVVDQYKKSSNKLLVEIFADHPGqsgda 909  Harpegnathos ...
BAG30740      553 NNNHLGKSapylKPKPPKPGCQAAHFAIGHYAGNVGYNITGWLEKNKDPLNDTVVDQFKKGANKLLVEIFADHPGqsgda 632  Papilio xuthus
EEB11219      553 NATHLGKSapyrKPAPPKPGCQAGHFAIAHYAGTVSYNITGWLEKNKDPLNDTVVDQFKKGQNKLLVEIFADHPGqsadp 632  human body louse
XP_008179221  557 TSNHLGKSpnfrKPAPPKPGCQAGHFALAHYAGVVSYNITGWLEKNKDPLNDTVVDQFKKGTNKLLVEIFADHPGqsggq 636  pea aphid
EAT42758      553 MNNHLGKSapfqKPKPPKPGCQAAHFAIGHYAGVVSYNITGWLEKNKDPLNDTVVDQFKKGQNKLVVEIFADHPGqsgga 632  yellow fever ...
AHF46691      550 ITNHLGKSapfmKPRPPKPGIPAGHFAIGHYAGVVSYNITGWLEKNKDPLNDTVVEQFKKGENSLLVEIFSEAAAapaeg 629  yellow fever ...
EDS44957      553 MTNHLGKSppfqKPRPSKPGIPAGHFAIGHYAGVVTYNITGWLEKNKDPLNDTVIDQFKKGTNALIVEIFADHPGqsgpp 632  southern hous...
Feature 1                                                                                         
4QBD_A        645 -------eqakGGRGKKGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIR 717  fruit fly
XP_008179213  637 a-----daggkGGRGKKGGGFATVSSSYKEQLNNLMTTLKSTQPHFVRCIIPNELKQAGVIDSHLVMHQLTCNGVLEGIR 711  pea aphid
EFN74640      833 g----gggggkGGRGKKGGGFSTVSSSYREQLNNLMATLRATQPHFVRCIIPNELKQPGVIDSHLVMHQLTCNGVLEGIR 908  Camponotus fl...
EFN88457      910 g----gggggkGGRGKKGGGFSTVSSSYREQLNNLMTTLRATQPHFVRCIIPNELKQPGVIDSHLVMHQLTCNGVLEGIR 985  Harpegnathos ...
BAG30740      633 s----argggkGGRGEKGGGFATISSAYREQLNNLMTTLRSTQPHFVRCIIPNELKQAGLIDSHLVMHQLTCNGVLEGIR 708  Papilio xuthus
EEB11219      633 -------aaasGGRGKKGGGFATVSSSYKEQLNNLMTTLKSTQPHFVRCIIPNEMKQAGVIDSHLVMHQLTCNGVLEGIR 705  human body louse
XP_008179221  637 a-----daggkGGKRTKGSAFMTVSTLHREQLNNLMTTLKSTQPHFVRCIIPNELKQAGVIDSHLVMHQLTCNGVLEGIR 711  pea aphid
EAT42758      633 d-----agggkGGRGKKGAGFATVSSSYKEQLNNLMTTLKSTQPHFVRCIIPNELKQTGLIDAHLVMHQLTCNGVLEGIR 707  yellow fever ...
AHF46691      630 a-----apaakGGRGKKGAAFATVSSAYKEQLNNLMTTLQSTSPHFVRCIIPNELKQTGLIDAKLVMHQLTCNGVLEGIR 704  yellow fever ...
EDS44957      633 pgsddgkggkgGGRGKKGAGFATVSSAYKEQLNNLIRTLCSTSPHFVRCIIPNELKQTGLIDAHLVMHQLTCNGVLEGIR 712  southern hous...
Feature 1                                                                      
4QBD_A        718 ICRkGFPNRMMYPDFKMRYQILnpkgikgiEDPKKCTKVLIESTELNDDQYRLGNTKVFFR 778  fruit fly
XP_008179213  712 ICRkGFPNRMVYPDFKLRYKILapaaaekeTDPKKCAGVILENVGLDPDKYRLGHTKVFFR 772  pea aphid
EFN74640      909 ICRkGFPNRMVYPDFKLRYKILcanavqepCEPQKATQIILDQINLESDQYRMGHTKVFFR 969  Camponotus floridanus
EFN88457      986 ICRkGFPNRMVYPDFKLRYKILcanavpepCEPQKATRIILETINLESDQYRMGHTKVFFR 1046 Harpegnathos saltator
BAG30740      709 ICRkGFPNRMVYPDFKLRYKILapqaadkeTDPKKVAQVILDATGLDPESYRLGHTKVFFR 769  Papilio xuthus
EEB11219      706 ICRkGFPNRMVYPDFKLRYKILnpkevskeSDPKKCAELILNASGLDTELYRLGHTKVFFR 766  human body louse
XP_008179221  712 ICRkGFPNRMVYPDFKLRYKILapaaaekeTDPKKCAGVILENVGLDPDKYRLGHTKVFFR 772  pea aphid
EAT42758      708 ICRkGFPNRMMYPDFKLRYKILnpkaaeeqKEPKNVADVILTSIGLDTESYRLGHTKVFFR 768  yellow fever mosquito
AHF46691      705 ICRkGFPNRMMYPDFKQRYLILapaamqaeQDSKKAAEKCFEAIQLDPDSYRIGHTKVFFR 765  yellow fever mosquito
EDS44957      713 ICRkGFPNRMNYPDFKQRYLILapaamqaePEGKVAAEKCMEAVALDPDLFRIGHTKIFFR 773  southern house mosquito

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