Conserved Protein Domain Family
MYSc_Myo28

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cd14889: MYSc_Myo28 
class XXVIII myosin, motor domain
These myosins are found in fish, chicken, and mollusks. The tail regions of these class-XXVIII myosins consist of an IQ motif, a short coiled-coil region, and an SH2 domain. The catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. CyMoBase classifications were used to confirm and identify the myosins in this hierarchy.
Statistics
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PSSM-Id: 276854
Aligned: 3 rows
Threshold Bit Score: 1259.05
Created: 7-Jan-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    #### ####                                            
EKC33506       21 KVLLNELKVRYMDSnIYTYVGDILVAINPFRPLHIYGEEESQKYYlekKSSNPPHIFAIADAAYQCMLGyggriPQNQCV 100  Pacific oyster
XP_005172645   53 KCLLEVLTGRFTQNlIYTYIGDILVAINPFKYLSIYEKEVSQRYKcheKKSLPPHIFAVADRAYQSMLGrlamgPKNQCI 132  zebrafish
XP_007895376   20 NILLEVLSRRFLQDhIYTYVGDILIAINPFKYLPLYEKTVSEKYKc-sTNGLPPHIFAVAFRAYQSMLGrlasgSKNQCI 98   elephant shark
Feature 1            ########                                    ###########                      
EKC33506      101 LISGESGAGKTESTKLIIKQLIELCRGNTQLEQQILQVNPLLEAFGNARTAMNDNSSRFGKYIQLIFRDGHVDGAKISEY 180  Pacific oyster
XP_005172645  133 VISGESGAGKTESTKLLLRHIMELCKANSQLEQQILQVNPLLEAFGNAQTVMNDNSSRFGKYIQLRFQNSSVKGAKINEY 212  zebrafish
XP_007895376   99 VISGESGAGKTESTKLLLRQIMELCRGNSQLERQVLQVNPLLEAFGNAQTVMNDNSSRFGKYIQLRFYNNTVKGAKINEY 178  elephant shark
Feature 1                                                                                         
EKC33506      181 LLEKSRVVHQNgEEENFHIFYYMFGGLSAEQRKNYNLLPPGKHRyltngadclkrepsyfkKQYDELVNAMDLVGFTDEE 260  Pacific oyster
XP_005172645  213 LLEKSRVVHQDqGEQNFHIFYLMLAGISLEDKEIYGLLDPTLYRylngrfgq-edvvqtwrVKYAEVCNAMDMVGFEEQE 291  zebrafish
XP_007895376  179 LLEKSRVVHRDeGERNFHIFYYMFAGISAADQEVYGLLDPKFYRylnhkygn-ketvqqwgTKYHEVCNAMDMVGFLEQE 257  elephant shark
Feature 1                                                                                         
EKC33506      261 EDNLFSIIAAILHMGNVTFEMDDDEasfve-dengpVKMAANVLGVSSEELVGTLTNMVTFTRGEqikRHYTKAMAEDAR 339  Pacific oyster
XP_005172645  292 KVDMMTILAGILSLGNITFETTDSDalkvseasrgwLKATAGQFGVQEEDLLKSLTCTTSMTRGEaiqRLHNQQQAEDAR 371  zebrafish
XP_007895376  258 QVDMLTILAGILSLGNIVFEPQDTGilkvtneskgwLKAAAGQFGVEEEDLLKCLICTLAVTRGEsiqRHHTKQQAEDAR 337  elephant shark
Feature 1                                                 ######                                  
EKC33506      340 DAVSKAMYGRLFGWIVNKINQLLAPKdqs-svEAREIGILDIFGFEHFEkNSFEQACINLANEQLQFFFNQHVFKMEQEE 418  Pacific oyster
XP_005172645  372 DSIAKVAYGRVFGWIVSKINEQLAPKvdf-dvELNEIGILDIFGFENFAvNRFEQLCINLANEQLQYFFNHHIFLMEQKE 450  zebrafish
XP_007895376  338 DSIAKVAYGRVFGWIVSKVNQLLAPKedmdtvDLQEIGILDIFGFENFAvNRYEQMCINLANEQLQYFFNHHIFLMQQKE 417  elephant shark
Feature 1                                                                                         
EKC33506      419 YMKEGIDWKEIKFvDNQPLLNLFLnKPIGILSLLDEEThFPKGTDESLVEKLNIHFGGNSYYgksaqsksrKFTINHYAG 498  Pacific oyster
XP_005172645  451 YKEEGITWETITYkDNKPILDLFLmKPIGILSLLDEQSaFPQATDRDFVDKLNSKFKSAPNFevvr-nhtpLFTVVHYAG 529  zebrafish
XP_007895376  418 YKQEELEWKAITYkDNKEILDLFLaKPLGIFSLLDEQStFPQASDKTFVDKLNTSFKGNSCYkidr-rrspAFTVMHYAG 496  elephant shark
Feature 1                                                                                         
EKC33506      499 KVTYDASRWLDKNRDTLPPGQITRTGSLALQARkstrttrrskkp----------ppagshaggrkrKQTVAGQFKNSLG 568  Pacific oyster
XP_005172645  530 KVQYNASGFLEKNRDTIPASIRELFINSVTPLLsvlfaatisrtgtlmp--rkaklqvsddnfnstrKQSVGAQFKHSLA 607  zebrafish
XP_007895376  497 KVLYNASGFLEKNRDTIPASIRGLFINSITPLLsvlfsatvsrtgtlmpqqraklvqrnednfnstrKQSVGAKFKHSLS 576  elephant shark
Feature 1                                                                                         
EKC33506      569 ILMERMMSSSPIFVRCLKPNHVKVPgkFDETYIQGQLLYTGMLETIKIRREGFAVRPSFAEFVEKYKIIvceaalpgtkq 648  Pacific oyster
XP_005172645  608 VLMEKMFAASPHFVRCIKPNRSKQPdqLDSKLVLDQLRYNGLMETIRIRRDGFSWRPTFREFAERYNILllkpdlptdks 687  zebrafish
XP_007895376  577 VLMEKMFAANPHFIRCIKSNTNKLPsqLDSKFLMDQLRYNGLLETIRIRREGYSWRPLFEEFAERYGILlitpnisftke 656  elephant shark
Feature 1                                 
EKC33506      649 nclrILKASKIVGWQMGKTKVFMK 672  Pacific oyster
XP_005172645  688 scmsILNSTELSGWKCGSSRLFFK 711  zebrafish
XP_007895376  657 sclaLLQTTDLKDWKCGKTRLFFK 680  elephant shark

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