Conserved Protein Domain Family
MYSc_Myo4

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cd14872: MYSc_Myo4 
class IV myosin, motor domain
These myosins all possess a WW domain either N-terminal or C-terminal to their motor domain and a tail with a MyTH4 domain followed by a SH3 domain in some instances. The monomeric Acanthamoebas were the first identified members of this group and have been joined by Stramenopiles. The catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. CyMoBase classifications were used to confirm and identify the myosins in this hierarchy.
Statistics
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PSSM-Id: 276839
Aligned: 7 rows
Threshold Bit Score: 1085.96
Created: 7-Jan-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                        #########                                     
ELR21917   101 AMIVHNLRKRFkNDQIYTNIGT-------ILISVNPFKKLPLYTPTVMDQYMHKGVKe-MPPHTFNIADNAYKAMIEKk- 171  Acanthamoeba cas...
ELR21237   101 AMIVHNLRKRFkNDQIYTNIGT-------ILISVNPFKRLPLYTPTVMDQYMHKGTKe-MPPHTYNIADDAYRAMIDNr- 171  Acanthamoeba cas...
P47808      89 AMIVHNLRKRFkNDQIYTNIGT-------ILISVNPFKRLPLYTPTVMDQYMHKVPKe-MPPHTYNIADDAYRAMIDNr- 159  Acanthamoeba cas...
A23662      89 AMIVHNLRKRFkNDQIYTNIGT-------ILISVNPFKRLPLYTPTVMDQYMHKVPKe-MPPHTYNIADDAYRAMIDNr- 159  Acanthamoeba sp.
CBK23300   182 PSILYTVRKRYmEGKIYTWVGSnk----tILLSVNPFQNLPLYSPEQISLHANPPPNrlLPPHVYDIAYSAFQEMSVDg- 256  Blastocystis hom...
EGB10675   120 AAMVHDLKERYkSDDIYTRVAVwvgashtVLVSINPFKRLPIYGVNLMREFAEPAPNrlLPPHPFAVANGAYLRLRVDa- 198  Aureococcus anop...
EGB11823    23 GLMLHNLRVRFlRDEIYTGVGD-------IVVALNPFKRLPLYGSEVIDAYNRAGNKp-MPAHPYKLAKAAVGALVEDat 94   Aureococcus anop...
Feature 1              ########                                    ###### ####                 
ELR21917   172 KNQSVLISGESGAGKTECTKQCLMYFAELAGSTNGVEQFILLANPILEAFGNAKTLRNnNSSRFGKWVEIHFDMSARICG 251  Acanthamoeba cas...
ELR21237   172 MNQSILISGESGAGKTECTKQCLTYFAELAGSTNGVEQNILLANPILESFGNAKTLRNnNSSRFGKWVEIHFDQKGSICG 251  Acanthamoeba cas...
P47808     160 MNQSILISGESGAGKTECTKQCLTYFAELAGSTNGVEQNILLANPILESFGNAKTLRN-NSSRFGKWVEIHFDQKGSICG 238  Acanthamoeba cas...
A23662     160 MNQSILISGESGAGKTECTKQCLTYFAELAGSTNGVEQNILLANPILESFGNAKTLRN-NSSRFGKWVEIHFDQKGSICG 238  Acanthamoeba sp.
CBK23300   257 TDQSILISGESGAGKTEATKQCLGFIAEVAGSDSSLEQKVLQTNPVLEAFGNAKTVRNnNSSRFGKWIEVHFSNRNHVCG 336  Blastocystis hom...
EGB10675   199 ENQAILISGESGAGKTEATKQCLSFLAEVAGSTNNVEQRVLSANPVLEAFGNAKTVRNnNSSRFGRWMEVHFDNRGAIAS 278  Aureococcus anop...
EGB11823    95 RNQSILVSGESGAGKTEATKQCLSFLAEVAGSSGDIEQRVLGANPILEAFGNAKTTRNdNSSRFGRFSELQLDARLRIAG 174  Aureococcus anop...
Feature 1                                                                                      
ELR21917   252 ASTVNYLLEKSRVVYQiKGERNFHIFYQLVAGLDQETLAKWnlksaehyn--yintsgciTIDGVDDAKDFEEVKEAMVR 329  Acanthamoeba cas...
ELR21237   252 ASTINYLLEKSRVVYQiKGERNFHIFYQLVKGATAEQRRRWfvsgppesf-kflsqsgciDVEGVDDVKEFEEVFFAMGK 330  Acanthamoeba cas...
P47808     239 ASTINHLLEKSRVVYQiKGERNFRIVATELVKAPPRSRGGGgssparpesfkflsqsgciDVEGVDDVKEFEERVLCHGQ 318  Acanthamoeba cas...
A23662     239 ASTINHLLEKSRVVYQiKGERNFRIVATELVKAPPRSRGGGgssparpesfkflsqsgciDVEGVDDVKEFEERVLCHGQ 318  Acanthamoeba sp.
CBK23300   337 ASIECYLLEKSRVVDQqKGERNFHIFYQLLSSPDLCRAYNLtsaadyry----ltagqclEVEGMDDKANFLEVLNSFES 412  Blastocystis hom...
EGB10675   279 ARVENYLLEKSRVCGQaKDERSYHVFYQLGLSGRHASSGVAgtsaahgf----lslgsadKAAGVDDAADFRDVESALEQ 354  Aureococcus anop...
EGB11823   175 AKVTNYLLEKSRVKGQsDDERNYHAFYQLCAAPVGARDYGVgdagsyg------ylrkclEVRGIDDGADFDDVADATAS 248  Aureococcus anop...
Feature 1                                                                                      
ELR21917   330 LSFKp----EEINDVFQLTAAVLQLGNLMFGPemtgsgpdasksvVTDKGQAQIVADLLGVNs-AALEAALTSRLMEIRG 404  Acanthamoeba cas...
ELR21237   331 LGFSe----DDINNCMELISAILHLGNFEFVSg------------QGKNVETSTVANREEVKivATLLKNVTSKLMEIKG 394  Acanthamoeba cas...
P47808     319 ARVRvqfseDDINNCMELISAILHLGNFEFVSgqgkn---vetstVANREEVKIVATLLKVDp-ATLEQNVTSKLMEIKG 394  Acanthamoeba cas...
A23662     319 ARVRvqfseDDINNCMELISAILHLGNFEFVSgqgkn---vetstVANREEVKIVATLLKVDp-ATLEQNVTSKLMEIKG 394  Acanthamoeba sp.
CBK23300   413 LGFSq----EDRESVLSLLAAILKLGNIKYEEtggasl--hpgssISNEDVLCEAATLLQIPa-NSLKEAICTRRITVKE 485  Blastocystis hom...
EGB10675   355 LAFDd----AEVAALFSLTAGCLRVGDIEFAPagd-------gsaVANGDVAEDAAGLLGCAa-SDLSEALVCTAIEVRG 422  Aureococcus anop...
EGB11823   249 LGFDd----AQRSTVWGLVAGILKLGQVGFAAlggmsd--gsavdGGSAAVLAEVAAHLGVDg-AVLGDALTHRTLSIRG 321  Aureococcus anop...
Feature 1                                                               ######                 
ELR21917   405 CAp---TRIPLTPEQARDACDALAKALYGRLFDWIVRRINQSMKp-sSTQTTVIGVLDIFGFEIFQKNSFEQLCINFTNE 480  Acanthamoeba cas...
ELR21237   395 CDp---TRIPLTPVQATDATNALAKAIYSKLFDWLVKKINESMEpqkGAKTTTIGVLDIFGFEIFDKNSFEQLCINFTNE 471  Acanthamoeba cas...
P47808     395 CDp---TRIPLTPVQATDATNALAKAIYSKLFDWLVKKINESMEpqkGAKTTTIGVLDIFGFEIFDKNSFEQLCINFTNE 471  Acanthamoeba cas...
A23662     395 CDp---TRIPLTPVQATDATNALAKAIYSKLFDWLVKKINESMEpqkGAKTTTIGVLDIFGFEIFDKNSFEQLCINFTNE 471  Acanthamoeba sp.
CBK23300   486 GNgvnvTIIPLSCREAIQNCDALAKELYSRLFDWIVEKINLSLR---GERNKFIGFLDIFGFEIFEKNSFEQLCINYANE 562  Blastocystis hom...
EGB10675   423 TR----TLSPCAPAAAKAGARALAKAAYGRLFDWLVKRINVAVAqggAAGGKFIGVLDIFGFEIFESNSFEQLCINYTNE 498  Aureococcus anop...
EGB11823   322 QDd---MAVPLREAQALENRDALSKYAYDHLFDWLVGRVNAALRaadAGVACFIGILDIFGFEIFTLNSFEQLCINFTNE 398  Aureococcus anop...
Feature 1                                                                                      
ELR21917   481 KLQQHFNQYTFKLEEALYQSEEIKYEHIKFIDNQPVLDLIEKKTpqGVMLTLDEQLw---VPKGSDATFILACNKTHGMK 557  Acanthamoeba cas...
ELR21237   472 KLQQHFNQYTFKLEEKLYQSEEVKYEHITFIDNQPVLDLIEKKQpqGLMLVLDEQIs---IPKSSDATFFIKANQTHGGK 548  Acanthamoeba cas...
P47808     472 KLQQHFNQYTFKLEEKLYQSEEVKYEHITFIDNQPVLDLIEKKQpqGLMLVLDEQIs---IPKSSDATFFIKANQTQAAR 548  Acanthamoeba cas...
A23662     472 KLQQHFNQYTFKLEEKLYQSEEVKYEHITFIDNQPVLDLIEKKQpqGLMLVLDEQIs---IPKSSDATFFIKANQTQAAR 548  Acanthamoeba sp.
CBK23300   563 RLQQLFNSSTFKEEETVYRNEGVEFQHVDFIDNSEVLDMLENRFg-GLFCAIDDQVk---IRGGTDENLMKAIRNTLTKY 638  Blastocystis hom...
EGB10675   499 KLQQHFNRHTFKEEENLYRSEGIDFEPVPFIDNQPVLDLIEKKPd-GLLLALDDVVn---APQGSDAKWMARCEKSHAAK 574  Aureococcus anop...
EGB11823   399 KLQQLFNEHTFKTEAATYEREGVPFPPIDFVDNQPICDLIEKRG--GILTLLDDTVkgpgKPEQKDAKFSQNLDQACRAN 476  Aureococcus anop...
Feature 1                                                                                      
ELR21917   558 Qnvnyae------------vrtsniEFVIKHYAGDVTYDATGFLDKNKDTLQKDLLVVVEGTTNQFIsvmfpvip-dadr 624  Acanthamoeba cas...
ELR21237   549 Khanyee------------vrtsrtDFIIKHYAGDVIYDSTGMLEKNKDTLQKDLLVLSESSKQKLMnvlfpps--egdq 614  Acanthamoeba cas...
P47808     549 Stqlrgg-------------edsrtDFIIKHYAGDVIYDSTGMLEKNKDTLQKDLLVLSESSKQKLMkllfpps--egdq 613  Acanthamoeba cas...
A23662     549 Stqlrgg-------------edsrtDFIIKHYAGDVIYDSTGMLEKNKDTLQKDLLVLSESSKQKLMkllfpps--egdq 613  Acanthamoeba sp.
CBK23300   639 Scfdgn--------------crsplEFGVCHYAGKVTYTITGFTDKNRDRIFDYLYELVSSSSSPFIaslfpp----lss 700  Blastocystis hom...
EGB10675   575 KewvdvsekhkgsrgrgvkqkgdeeFFTVRHYAGAVTYHIVGFCEKNKDPLGRNLYDLLSLKAPAFPlvgkelfpdlgrn 654  Aureococcus anop...
EGB11823   477 Affvpand----------hrgvrgaVFSVRHYAGTVCYSCDGFVEKNADTLYKDLYDCLSASGNGLIaamfppl---pke 543  Aureococcus anop...
Feature 1                                                                                      
ELR21917   625 rtsKVTLGSQFRRQLEDLMTALNTTEPHFIRAIKPNMEKVPnkFQGTLSLQQLRYAGVFEAVKIRQTGYPFRYPHLEFLQ 704  Acanthamoeba cas...
ELR21237   615 ktsKVTLGGQFRKQLDSLMTALNATEPHYIRCIKPNSEKQAdlFHGFMSLQQLRYAGVFEAVRIRQTGYPFRYSHENFLK 694  Acanthamoeba cas...
P47808     614 ktsKVTLGGQFRKQLDSLMTALNATEPHYIRCIKPNSEKQAdlFHGFMSLQQLRYAGVFEAVRIRQTGYPFRYSHENFLK 693  Acanthamoeba cas...
A23662     614 ktsKVTLGGQFRKQLDSLMTALNATEPHYIRCIKPNSEKQAdlFHGFMSLQQLRYAGVFEAVRIRQTGYPFRYSHENFLK 693  Acanthamoeba sp.
CBK23300   701 stmRTTVCSKFQKQLKDLLTILQASQRKYIRCVKPNDKKRPrlFDCVHSLEQLRYSGVFEAVKIRKEGYPFRYSHQQFVH 780  Blastocystis hom...
EGB10675   655 prrQPTIAGQFRKQLSALMKIVDAADPCYVRCVKPNQQKKArlFDAKSSIEQMTYAGVFEAVKIRKSGYPFRLPHRRFAA 734  Aureococcus anop...
EGB11823   544 vtkRATLGGAFRKQLSALMETLRSTDPHYIRCVKPNQPKRArlFEGAAVLEQLRCAGVFEATAIRKQGYPFRFEYARFVV 623  Aureococcus anop...
Feature 1                                                      
ELR21917   705 RYAILnkaiakdnm---kdlktrcsaIIKSLKGDFSEVQVGKTRILYR 749  Acanthamoeba castellanii str. Neff
ELR21237   695 RYGFLvkdihkryg---pnlkqncdlLLKSMKGDWSKVQVGKTRVLYR 739  Acanthamoeba castellanii str. Neff
P47808     694 RYGFLvkdihkrygp--nlkqncdllLKSMKGDCXSKVQVGKTRVLYR 739  Acanthamoeba castellanii
A23662     694 RYGFLvkdihkryg---pnlkqncdlLLKSMKGDWSKVQVGKTRVLYR 738  Acanthamoeba sp.
CBK23300   781 RYRCLpmtkgisvs---sdvrqaiqdVIRSRPECKDRIYVGRSLVLYR 825  Blastocystis hominis
EGB10675   735 RYRPLvaahslgdg----sdrdkcraLLKNLNQDFGAVKMGATMVLYR 778  Aureococcus anophagefferens
EGB11823   624 RYKSImstgagwvpfastddrqrceeILAATKQKFPGLQRGKTMLLFR 671  Aureococcus anophagefferens

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