Conserved Protein Domain Family
bZIP_u2

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cd14811: bZIP_u2 
Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain; uncharacterized subfamily
Basic leucine zipper (bZIP) factors comprise one of the most important classes of enhancer-type transcription factors. They act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes including cell survival, learning and memory, lipid metabolism, and cancer progression, among others. They also play important roles in responses to stimuli or stress signals such as cytokines, genotoxic agents, or physiological stresses. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.
Statistics
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PSSM-Id: 269873
Aligned: 28 rows
Threshold Bit Score: 61.4676
Created: 18-Dec-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        ## ### ###### ###                                
CAK81967  121 HQLKLARNRQSARDSRKRKKIYIELLENKVEELTQEMLRLQATIANQNNYIN 172 Paramecium tetraurelia strain d4-2
EED89393  217 RQKRLERNRESARLSRRRRKAYLEELETKVSLLSNEMDRGRISHASMAVRTL 268 Thalassiosira pseudonana CCMP1335
EED94924  373 RQRRLARNRESARQSRRRKKERLAHLGEKVNRLQRQLETEIRLKIASMETGL 424 Thalassiosira pseudonana CCMP1335
EJK66630  419 RAQRLARNRESARNSRRRKKEQLSSLSTKVKKLQNMLDVEIRNKIKTMEVGM 470 Thalassiosira oceanica
EED94411  287 RKKRLARNRASARLRRLKKKNLVESYEGEVGILEGALHKLRSHRWGTDSDNH 338 Thalassiosira pseudonana CCMP1335
EEY64194  111 RQRRLARNRESARQSRRRKKQYLELLEEKVSQLTESIDTTRAAHLESANEAL 162 Phytophthora infestans T30-4
CBJ49204  248 RQKRLARNRESARQSRRRKKEHLELLEEKSLGELERHLAAMDASVAASSSGG 299 Ectocarpus siliculosus
EKU20079   57 REQRLARNRESARQSRRRKKENLENLSAKLGQSNMELEDLRHVIESNLRSQE 108 Nannochloropsis gaditana CCMP526
EJY77731  395 RQRRLEKNRESARESRKRKKNYINTLEAKVKTLESEVNRLRLVIQNQREKEK 446 Oxytricha trifallax
EER15923   36 GEANRMTRRESARQSRKRKKMYLETLEDKVQKLSSEVNRMKEYAATGLSLES 87  Perkinsus marinus ATCC 50983

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