1U7L


Conserved Protein Domain Family
V-ATPase_C

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cd14785: V-ATPase_C 
Click on image for an interactive view with Cn3D
Subunit C of vacuolar H+-ATPase (V-ATPase)
This family contains subunit C of vacuolar H+-ATPase (V-ATPase), a protein that plays a crucial role in the vacuolar system of eukaryotic cells. The main function of V-ATPase is to generate a proton-motive force at the expense of ATP and to cause limited acidification in the internal space (lumen) of several organelles of the vacuolar system. V-ATPases are multi-subunit protein complexes made up of two distinct structures: a peripheral catalytic sector (V1) and a hydrophobic membrane sector (V0) responsible for driving protons; subunit C is one of five polypeptides composing V1. The key function of the C subunit is intimately involved in the reversible dissociation of the V1 and V0 structures. It has also been identified as a mediator of the acidic microenvironment of tumors which it controls by proton extrusion to the extracellular medium. The acidic environment causes tissue damage, activates destructive enzymes in the extracellular matrix, and acquires metastatic cell phenotypes.
Statistics
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PSSM-Id: 270211
Aligned: 101 rows
Threshold Bit Score: 148.535
Created: 21-Dec-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 21 residues -Click on image for an interactive view with Cn3D
Feature 1:3-helical coiled coil [structural motif]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                      ##################
1U7L_A        11 FILISLPqnaqpvtapgskTDSWFNETLIGGra--fVSDFKIPef--kIGSLDt---LIVESEELSKVDNQIGASIGKII 83  baker's yeast
EIJ94879       2 HIFVSFPvdeev---sdelILSNVRKGLGSLgk--dCDLLSFPki--eSDSIDc---LFDSEERILTIENLLEDIIRKYN 71  Nematocida pari...
EPR78879      61 YFFIGLPvdked---drekAIESIKMKLNTP-----HVFLDIPef--kWSSMDd---LVNSSDEVERMEKNTSVLLKKVF 127 Spraguea lophii...
ELA47988       2 YFFISLPvds-------raSAVNLLTHLKKQhl--dVFKLNVPin--hWSSFGa---MIELTEQLDGLSRQVLDLFNKLL 67  Vavraia culicis...
AAT12369       2 LIYLGLP------------SQKQPRPTSGKVc----TQVVDVRdf--rCKSLDsiflCTDMIDDLEKRCLVLMSNMYQNF 63  Antonospora loc...
EJW02002       2 YIFAGLPide-------kkTEDEIKKNINISkh--kVVLKHMPqf--sINNFNs---LISAIDDLKVVETSITDLFAEYV 67  Edhazardia aedi...
EST41456       5 ITIIASPk-----------IPTTIQQSISSPniyqvLSCDSFP-----AASVSa---LMNQVDDSQRLLQSAQQQLARIE 65  Spironucleus sa...
XP_001708227  86 PTLLTVYgfatn--drkfnYLLKLRQASNGGv----VEPVLVSer--lSLPVDq---CLTVHDQVKKLKVSVLGLLERYE 154 Giardia lamblia...
EJW80866       1 MFLISIPieny-----teaKWLKLRTVALNFs---iFSNVRIPkf-riAPQIE----LYELLEDLLQLDNSVENLLRSLL 67  Wuchereria banc...
CCX30076      19 YIFVSIPnd--------egTLSQLKGALPGEr---vVTEFPMPpfesnIGDTSe---LAARATSLGELDKKVTADVTKIA 84  Pyronema omphal...
Feature 1        ###                                                                             
1U7L_A        84 EILqglnetstnayrt-----lpinnmpvpeylENFQWQTRKFkld--ksiKDLITLISNESSQLDADVRATYANYNSAK 156 baker's yeast
EIJ94879      72 TTYhaltqkvlvdt--------dvlgrgfdyflKSFSWDSIKYplt--lkmPELLSIIENEIMEAIEALKEKEKTYTDEK 141 Nematocida pari...
EPR78879     128 NDYrsilnidif------------esihsheaiKNFKWGFENHs------iLSLVEEFQVMQELIKKAIGKRVEKYDSVK 189 Spraguea lophii...
ELA47988      68 TVDrdlvkspsfv-----------knvdlnnkiERFVWPSEKYpra---alGDMFEMFVDELALIRKNFELRSANYDRSK 133 Vavraia culicis...
AAT12369      64 KNYryeaylcskvp---------kshenfenifLQISWHSEIYnsa--elvEDLVNLLAQEFNQAEEHCMNRVQYYANAT 132 Antonospora loc...
EJW02002      68 KYMekyelkeiss----------lslqklasmiKSFEWNTERYkps---nlEIIVKQIKCDISILSESISKRKREIDSMT 134 Edhazardia aedi...
EST41456      66 RLTqehlpa------------------rlhkvdDKFWKDYVQTfisq-kfiPPTIQSLKRRFDSGVEQFNRILAEFTEAD 126 Spironucleus sa...
XP_001708227 155 RVIytgkekmgkhfdytv-fvtdqnsrlrelfwLDFTRERVLTshti-esvFLEYDRCQEEFTRLNTKYTNLLAEYNKVD 232 Giardia lamblia...
EJW80866      68 CTFegvlqaegvdlle----hlvmhrhrfgeniTNFTWNTSKYspy--lelSDLCHLFYKYFRDLDQQMRNNVATYKENL 141 Wuchereria banc...
CCX30076      85 ELLkaivpdneakykmieyesesgkkveaieylQKFEWDANKYayerpsapPGAAPSIKDLENALESDTKGRIEKVGEAH 164 Pyronema omphal...
Feature 1                                                                                        
1U7L_A       157 TNLAAAERKKtgdlsvrslhdivkpeDFVLn---------------------------SEHLTTVLVAVPKs--lKSDFE 207 baker's yeast
EIJ94879     142 KHRAETASTVcrm----------ydaDIDEiehmavd---------------ddeacgPFFKRYYIGVYDKlrdkDIETL 196 Nematocida pari...
EPR78879     190 KEYKRLFLRKnggi---------keaDVYEna------------------------eeSTFIEKFYVILTKa--qIPKFK 234 Spraguea lophii...
ELA47988     134 RKMVDIKKRKngtlk------evdlaNIVDed------------------------edFEFLAYFYVLMDR----NRRFE 179 Vavraia culicis...
AAT12369     133 KRYEKLKGRAsgsla-------dislNVVAere-----------------------eeYEFLVPFFVVVPKn---AHDAL 179 Antonospora loc...
EJW02002     135 KLYENSKKITsgnl---------qeiSILSe--------------------------eHDFLHEHFIVVPKs--kSKDFL 177 Edhazardia aedi...
EST41456     127 SALNTAQKATqgav---------hqrSVASllgn--------------------llvsSEYLESAVVCVPLa--qKGEFE 175 Spironucleus sa...
XP_001708227 233 AEIKAFEKMNdvsl---------lscSLAKyvnvqn----------------lddfftTDYLTCCLIVVPKt--gVNEFL 285 Giardia lamblia...
EJW80866     142 KIATEYITVEetlat-------qnltTLIReet----------------------vidTPYIQSVYVAVPQq--sVHTWL 190 Wuchereria banc...
CCX30076     165 ANYLEASKRNdirtlpi--ahlfrkeDFVQtlkleieheppsedqsskarkpnkieffPEYIVTLLAIVPHk--kTEDWC 240 Pyronema omphal...
Feature 1                                                                                        
1U7L_A       208 KSYETLsk------------------------------nVVPASASVIAEDaeYVLFNVHLFKKnVQEFTTAAREKkFIP 257 baker's yeast
EIJ94879     197 SSINGLf--------------------------------IESGKMVKKCDD--GEIYQSLGRNDcEEDIIKSLEEHgFIA 242 Nematocida pari...
EPR78879     235 ELVVNNe-------------------------------fLSQESLECLKKEeeEYLYKVLGIKSkEVEILNEIKKNnFII 283 Spraguea lophii...
ELA47988     180 DEDIKDl--------------------------------IYVKEVAGDEEQ--HLVRFLGLKSK-REQIEKQLVERkYTV 224 Vavraia culicis...
AAT12369     180 SKMTVEne------------------------------kVANSTMEQVCADenYVLFKFYGMKSaEADIKKLIQQSgFIL 229 Antonospora loc...
EJW02002     178 ESVKTCe-------------------------------fISSEAVDPVLTDenFILYKIMGLRSnRDQIKQIITRMgYFY 226 Edhazardia aedi...
EST41456     176 KLIPSLp-------------------------------gLVPNSNTIAQSDvgHAAYALVVFKPeLLQLKDALAKQkYQL 224 Spironucleus sa...
XP_001708227 286 AEYAALgcedadgakkkgrpdqptvtptlpldgdsavlgVVPGSARRLKDDstHALFSVILFKKdQQRCLDYFREKkWIV 365 Giardia lamblia...
EJW80866     191 NVYETLhd------------------------------sVVSCSSCFIIEDndYKLYSVAIVRDdFLEFRDNCAEIgFIA 240 Wuchereria banc...
CCX30076     241 QNYSKLkgme--------------------------agmVVPDSSFELSESetYKFYSVTLVKKyKDTFIQAAKAEdYII 294 Pyronema omphal...
Feature 1                                                                                        
1U7L_A       258 REFnyseelidqlKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPp--HFNIKIIAVppk 335 baker's yeast
EIJ94879     243 AQPkhtkeeylrqKEEEKESAAHLMETECEYERLILGRLPSLYTLLLHVKHLGLYIESVLRYGLPa-tFCFFTLESKh-- 319 Nematocida pari...
EPR78879     284 KKNnpi----qniDEKLEAVEKDYKEIENTYSIFLYNTALDLLNLLMQLKITKVYIESVLRYGISt-sYLFVLTGDDk-- 356 Spraguea lophii...
ELA47988     225 KHFeh-------fDEDVDRIAIDFSVVEKGYFTFVDTYLLESFDLLLCVKLTKLYVDSVLQYGLPn-sYIFLGLKDKsmd 296 Vavraia culicis...
AAT12369     230 KTFedd-----deFSKNMEEVSSQKETEQCFSTFMEEHIFKLFRLYFSLKVTRVYLDCFLIYGLPa-dYTIFCVQGKkak 303 Antonospora loc...
EJW02002     227 REGitkee-lekqKSDAELHIKNYHTKCSNLAVFFDTNFNDIFSYFMHVKLLKLYADSIFTYGLGdlcFFAFEDDSK--- 302 Edhazardia aedi...
EST41456     225 REYqd------ieDGDTEILKGARKSALQRFTTFLASTQGEYLSLTLSTYIMRGALESQLRFGKDg--KIVIIIDHNs-- 294 Spironucleus sa...
XP_001708227 366 REYipeea-dagsEGRLATLTHVKADREKAFQQHIESTLAACLALAIDTSILELYIEAQLRFGAD---FQMLMFMSSgv- 440 Giardia lamblia...
EJW80866     241 REYqcdedefakkLHERRKLEEATQYQNIMLVQWLKIIADDMFEVLIHIKVFRAYIGSLTRFGQDk--FQIIMFYPRrna 318 Wuchereria banc...
CCX30076     295 RDVdwss---adsKSEAQAIIDAEVQTFEEFLNLASTAYSELFMDLLHIKMLRIYVESILRYGPGr-tFLSVVVGTHnnd 370 Pyronema omphal...
Feature 1                                                                           
1U7L_A       336 ---nlSKCKSELIDAFgflg---------gnaFMKDKKGkinkqdtslhqyaslvdtEYEPFVMYII 390 baker's yeast
EIJ94879     320 ----gNKVIHKWKKLAas------------wkYSNRIAAvektti-------sednaALHDFVYKMI 363 Nematocida parisii ERTm3
EPR78879     357 ----eSKIIKSWIKIIkdwk--------fsksCSVDVKGkldee---------iaccDMMDFSKETE 402 Spraguea lophii 42_110
ELA47988     297 --gvvKKWIKALKNFD----------------FGNRVVDyka-------------fdERVAYSSVEE 332 Vavraia culicis subsp. flori...
AAT12369     304 ---dvVKYIKELAACYglsrgsienmeahmstMSDNISScl--------------diAAREVVFHLI 353 Antonospora locustae
EJW02002     303 -----DRLIRLLIKLAkkwnl-------sdrvNKNSNSA------------------DSSAYIIVKN 339 Edhazardia aedis USNM 41457
EST41456     295 ----qKQVRNAIKTSFqn-------------aADEDADMydei----------etdnAFLPYVLVTG 334 Spironucleus salmonicida
XP_001708227 441 ---trKGLKQIVNYSFnellng-----cdqrvYDVDVEAe----------------nPYLPFVLCST 483 Giardia lamblia ATCC 50803
EJW80866     319 tqrllFELRKLFEEEYmevt--------dqsdTEEELEQv----------------pYYPPFLIYKV 361 Wuchereria bancrofti
CCX30076     371 ---daNTVTDILYDKYahla---------gkaVHYDEKGriikqat----eggieeeHWVPFSCYEI 421 Pyronema omphalodes CBS 100304

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