Conserved Protein Domain Family
bZIP_CEBP-like_1

?
cd14716: bZIP_CEBP-like_1 
Basic leucine zipper (bZIP) domain of CCAAT/enhancer-binding protein (CEBP)-like proteins: a DNA-binding and dimerization domain
This group is an uncharacterized subfamily of CEBP-like proteins. CEBPs (or C/EBPs) are Basic leucine zipper (bZIP) transcription factors that regulate the cell cycle, differentiation, growth, survival, energy metabolism, innate and adaptive immunity, and inflammation, among others. They are also associated with cancer and viral disease. There are six CEBP proteins in mammalian cells including CEBPA (alpha), CEBPB (beta), CEBPG (gamma), CEBPD (delta), and CEBPE (epsilon), which all contain highly conserved bZIP domains at their C-termini and variations at their N-terminal regions. Each possesses unique properties to regulate cell type-specific growth and differentiation. The sixth isoform, CEBPZ (zeta), lacks an intact DNA-binding domain and is excluded from this subfamily. bZIP factors act in networks of homo and heterodimers in the regulation of a diverse set of cellular processes. The bZIP structural motif contains a basic region and a leucine zipper, composed of alpha helices with leucine residues 7 amino acids apart, which stabilize dimerization with a parallel leucine zipper domain. Dimerization of leucine zippers creates a pair of the adjacent basic regions that bind DNA and undergo conformational change. Dimerization occurs in a specific and predictable manner resulting in hundreds of dimers having unique effects on transcription.
Statistics
?
PSSM-Id: 269864
Aligned: 5 rows
Threshold Bit Score: 96.0491
Created: 15-Aug-2013
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1          ## ## ### ###### #   #                                  
CAG03896    50 DSEEYRIRRERNNLAVRKSRDKAKMRNLETHTKCWNWRRRTTVYRSAWSSCPGSWPPCAT 109  spotted green pufferfish
CBY10713   272 ENNEYKKKRLRNNIAVRKSRDKAKNRQMEIQGKLMELANENKTQKQVIGKLKDDFDKLEA 331  Oikopleura dioica
CBY21573   150 ETDAYRKKRIRNNIAVRKSRERAKLRLEGTQKKLIELHTETQTQKELIIHMQQQCMEWET 209  Oikopleura dioica
EOB01043   149 RCDEYKLRRERNNIAVRKSRDKAKQRNVETQQKPGRVQGSRVRAGGAGAEEEQAAGSTGS 208  mallard
EMP30589   512 DSLEYRLRRERNNIAVRKSRDKAKRRVLETQQRALMLENLQKHSTLHATFQPNSQIGEEM 571  green seaturtle

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap