Conserved Protein Domain Family
R-PTPc-M-2

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cd14635: R-PTPc-M-2 
PTP domain of receptor-type tyrosine-protein phosphatase M, repeat 2
Receptor-type tyrosine-protein phosphatase M (PTPRM), also known as protein-tyrosine phosphatase mu (R-PTP-mu or PTPmu), belongs to the type IIb subfamily of receptor protein tyrosine phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs (EC 3.1.3.48) catalyze the dephosphorylation of phosphotyrosine peptides. PTPRM/PTPmu is a homophilic cell adhesion molecule expressed in CNS neurons and glia. It is required for E-, N-, and R-cadherin-dependent neurite outgrowth. Loss of PTPmu contributes to tumor cell migration and dispersal of human glioblastomas. PTPRM contains an extracellular region with an Meprin-A5 (neuropilin)-mu (MAM) domain, an immunoglobulin (Ig) domain, and four fibronectin type III (FN3) repeats, a transmembrane domain, and an intracellular segment with a juxtamembrane domain similar to the cytoplasmic domain of classical cadherins and two tandem PTP domains. This model represents the second (repeat 2) PTP domain.
Statistics
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PSSM-Id: 350483
Aligned: 4 rows
Threshold Bit Score: 439.893
Created: 14-Oct-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
catalytic siteactive site
Feature 1: catalytic site [active site], 2 residue positions
Conserved feature residue pattern:C RClick to see conserved feature residue pattern help
Evidence:
  • Comment:the catalytic cysteine initiates a nucleophilic attack on the phosphate group of the substrate, forming a transient phosphoenzyme intermediate and releasing the substrate dephosphorylated; the transition state is stabilized by the arginine present in the catalytic pocket

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
XP_008432570 1321 YINAALMDSykqpsAFIVTQHPlpntvkDFWRLVLDYhcTSIVMLNDVdpaQLCPQYWPengvhrhgpiqVEFVSADLEE 1400 guppy
XP_010202205  269 YINAALMDSykqpsAFIVTQHPlpntvkDFWRLVLDYhcTSIVMLNDVdpaQLCPQYWPengvhrhgpiqVEFVSADLEE 348  speckled mous...
XP_017950524 1313 YINAALMDSyvqpsAFIVTQHPlpntvkDFWRLVLDYhcTSIVMLNDVdpaQLCPQYWPengvhrhgpiqVEFVSADLEE 1392 tropical claw...
P28827       1242 YINAALMDSykqpsAFIVTQHPlpntvkDFWRLVLDYhcTSVVMLNDVdpaQLCPQYWPengvhrhgpiqVEFVSADLEE 1321 human
Feature 1                                                                            #     #      
XP_008432570 1401 DIISRIFRIYnaarpqdgyRMVQQFQFLGWPMYRDTPmskrsFLKLIRQVDKWQEEydggegRTVVHCLNGGGRSGTFCA 1480 guppy
XP_010202205  349 DIISRIFRIYnaarpqdgyRMVQQFQFLGWPMYRDTPvskrsFLKLIRQVDKWQEEynggegRTVVHCLNGGGRSGTFCA 428  speckled mous...
XP_017950524 1393 DIISRIFRIYnasrpqdgyRMVQQFQFLGWPMYRDTPvskrsFLKLIRQVDKWQEEynggegRTVVHCLNGGGRSGTFCA 1472 tropical claw...
P28827       1322 DIISRIFRIYnaarpqdgyRMVQQFQFLGWPMYRDTPvskrsFLKLIRQVDKWQEEynggegRTVVHCLNGGGRSGTFCA 1401 human
Feature 1                                                       
XP_008432570 1481 ISIVCEMLqhQHSVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALE 1526 guppy
XP_010202205  429 ISIVSEMLrhQRAVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALE 474  speckled mousebird
XP_017950524 1473 ISIICEMLhhQRAVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALE 1518 tropical clawed frog
P28827       1402 ISIVCEMLrhQRTVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALE 1447 human

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