Conserved Protein Domain Family
CBM_SBP_bac_1_like

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cd14489: CBM_SBP_bac_1_like 
Putative Carbohydrate Binding Module (CBM) of extracellular solute-binding protein family 1
Domains in this family co-occur with extracellular solute-binding domains which are periplasmic components of ABC-type sugar transport systems involved in carbohydrate transport and metabolism. Carbohydrate binding modules of family 6 (CBM6), also known as cellulose binding domain family VI (CBD VI), and related CBMs (CBM35 and CBM36) are non-catalytic carbohydrate binding domains found in a range of enzymes that display activities against a diverse range of carbohydrate targets, including mannan, xylan, beta-glucans, cellulose, agarose, and arabinans. These domains facilitate the strong binding of co-occuring (catalytic) modules to their insoluble substrates.
Statistics
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PSSM-Id: 271155
Aligned: 11 rows
Threshold Bit Score: 202.945
Created: 8-Jul-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
YP_001409817  236 SIPIAIEAERif-gkSDFLVSIINTQTSDvtpy-eplKRKINVIDQntYKQSGQEVHWYVDIQTPGLYKIAFRYQQslnR 313  Fervidobacter...
YP_001637424  212 GVLIELEAEKps-ykNDTAIRPISRQNLEvtpy-dpyRSRLNVIGGesWDQSGTTVYYEFTVPQDGWYNITLRAIQdykN 289  Chloroflexus ...
ACX65551      255 DQYILIQAEDak-rkSSPTLYPTSDRSSPtvvpydvsKIRVNTIGGvnWKLPGQWIEWEFEVEEDGLYQIALKQKQdqlR 333  Geobacillus s...
YP_003474651  225 GSSLYFQAEHltassSASLGSMYSRSDPLlqpv-speKMLLNIAGGlnYSNDGQWMEWELDVPQDGLYLLDFKARQsykS 303  Clostridiales...
ACX63517      270 GTLLAIQGEDav-akSSPTLYPLSERSSPsvspysasKVRINTIGGfnWRLPGKWIEWELDVPESGLYKIAFKSQQnfvR 348  Geobacillus s...
YP_002335695  221 TKDLMIEAEDli-lkSDFTSSIGNEQTPEitpf-eitKKRLNNILEdtFSSSGQKLIWIFNIDEPGLYKIAFRYKQtinK 298  Thermosipho a...
YP_003243228  248 SAMIVKEAEKpd-fkNDTTINPLPSRNLGvspy-atnLLLLNTLGGktWDISGQTVYYDIHVEHDGLYQIGVKYKQedkP 325  Geobacillus s...
YP_001181187  236 DIVIKVQGEQpy-lkSDPILYPTYDRTDPatepyhvsKIRLNTIGQwnWRYPGMWISWKIEVPESGYYKIAIKARQnfvR 314  Caldicellulos...
ABX42635      289 GILVRVEAESvt-ktSSQMLYPKQDQSSPavypsstkELLNNTIGGnsWRLVGQWMEWDFEVPESGYYKIGFYAKQnfvR 367  Clostridium p...
YP_003829635  254 KFNLVVQGEDst-lrSESSLYAKYDRSSPttvpnsvtTTVLNYVGGeaWRSSGQWIEWNFEVPEDGYYNIMVKARQnysR 332  Butyrivibrio ...
YP_002251302  253 NIIVKIQGEKay-lkSEPTLYPIYDMSNPlnepyssrNKLLNIIGGynWRSSGQWIEWKFTVPEDGFYKIGFKFRQnanP 331  Dictyoglomus ...
YP_001409817  314 GVPVFRRIYVDGEVPFKEFDNYAFEYtgykWVDKVLLdsKGNPYFVYLDKGpHLITLEVTTGlFEQTIVYLQD 386  Fervidobacterium nod...
YP_001637424  290 NFTVYRRILIDDRVLFAELNAVPFNYdp-vWRNYTLG--GETPYQIYLTRGsHVLGIEATTApYHDSIQRVRV 359  Chloroflexus auranti...
ACX65551      334 GVFATRSLMIDGEFPFQEMKRIRFHYdr-dWQMNVLG--VEEPYLFHFTKGtHRIRMMVSLGeIAPLLQTIES 403  Geobacillus sp. Y412...
YP_003474651  304 GLSVNRRIYIDGRLPFKAAQNLAFPYas-dWQFISLKdeKGNPAQIFLTKGkHSLTMEVVPGpEAAVIVGLTD 375  Clostridiales genomo...
ACX63517      349 GMYSTRKLTIDGKVPFEEMNHVAFRFkn-gYRMDVLG--GDEPYLFRLEQGkHVLRLEASLGeFAPLIHEVED 418  Geobacillus sp. Y412...
YP_002335695  299 GIPSFRNIKIDGKIPFKEFEFYPFYYtgykWTTVTLSd-GVKPYFVYLDKGlHFLTLEVATGpFEKYIQFLQE 370  Thermosipho africanu...
YP_003243228  326 NSRVFRTFTIDGQIPFAEAKQYPFEYst-sWKTEVLQg-AEGPYLFYLSKGkHRIGIMADASpYFDVMQLLQH 396  Geobacillus sp. Y412...
YP_001181187  315 GLSVHRKLYIDGKVPFKEAEDVEFPYsi-rWYMKTIGq-KGKPYLVYLTKGvHEIKLEATLGsFTEILSRVEN 385  Caldicellulosiruptor...
ABX42635      368 GIYVSRKITIDGNVLFNELSDYGFQYqs-nWRFDTLMdeNNDAYKIYLEAGnHTLRMQNVLGeFSSIIGEVQE 439  Clostridium phytofer...
YP_003829635  333 GSVSSRTVLIDGEVPFADLSEIAFDYkn-dWECKDLAseDGTPFNFYLTKGqHTIRLEATLGgMGGILEEMED 404  Butyrivibrio proteoc...
YP_002251302  332 GIPSERTLYIDGRIPFKEVRNIKFKYdt-kWQFKYLGn-GKDEYLFYLTKGeHTLRLKVTYEsIAEVIRNILQ 402  Dictyoglomus thermop...
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