4L1N


Conserved Protein Domain Family
nt01cx_1156_like

?
cd14437: nt01cx_1156_like 
Click on image for an interactive view with Cn3D
Uncharacterized proteins conserved in Clostridia
Some members of this uncharacterized protein family have been annotated as putative lipoproteins. The structure resembles that of a partial beta-propeller (3 out of 6 blades), suggesting that family members might form dimers.
Statistics
?
PSSM-Id: 271227
Aligned: 10 rows
Threshold Bit Score: 188.809
Created: 2-Mar-2014
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4L1N_A         5 KKDVKIETNTNKKDSEKENVN-----NTQENVSVEKQSAKKakv-keDNSKKXFLKKELGkNSKPTFa-TKWKNSSnnKF 77  Clostridium nov...
WP_003375405  43 SMETNKQENINNNENIKDEIKqvkpnKQQKPLGKDLTSESK------EISDIKFIRKKINeKTEPKFs-TSWKKSS--KV 113 Clostridium bot...
YP_003782178  33 STQSSGSTNSKKIDSSNANNNke--tQKPKEKMKTSSTAVK------SSSEIKFIKQEMNnNSTVSFn-TTWKSNKngTY 103 Clostridium lju...
WP_003357505  36 QEEQKVESNNNDKEEKDKKNN-----TEAKNEEKKDEKEVSe-----KTNFSKVEKEEIVdKKFQGEnnTEWKESEqkKY 105 Clostridium bot...
WP_007063145  39 NETTSAQKSDSKKNTSSEQVNp----KKQEAKPQTKSTNTK------SSSTIKFAKEQLDkSTKPKFs-TPWEDSTngTY 107 Clostridium car...
YP_006429527  40 IQQQRANYAAYVKKVKTAAAAg---pSEPDSGAVEDETPKPaiteqtEQLFRINTNPYVPaFILQGNy-VVHGSSPnkQY 115 Desulfitobacter...
YP_001393710  34 KVNTNTSSNNNDKKVNSDTAAv---dTKDKNNEQTTQNNGSssstakNTSGINFIKKQLDsSTEITFn-TDWKNSEdgSY 109 Clostridium klu...
YP_002457879  22 IQQQRANYAAYVKKVKTAAANp----SETDRGAVKEETPQPvtteqtGQLFRVTTNPYVPaFILQGNy-VVHGSSPnkQF 96  Desulfitobacter...
YP_007220081  37 MQEQRANYAAYVKKVKTAVVAn---pSETNSGLVKGESLRSestaptKELFRVTTNPYVPdFILQGNy-VVHGSSPdkRY 112 Desulfitobacter...
YP_004394946  24 SMETNKQEDINKNENKKDNIKev-kpNKQQRPSDKKSTNKSk-----GIIDMKFIKKKINeKTEPKFs-TKWKEAGknKI 96  Clostridium bot...
4L1N_A        78 SACIEGKgenaleEGVGKIYIKNLk-eQSKWELDLDqd------------qqKNTPKYIDWFDDNNLXVVISRAHGTVSQ 144 Clostridium nov...
WP_003375405 114 SACIEGKgpdaeeEGVGEIYIKNLk-nKEMWSLNLFqk------------qqKDTPKYIEWFDDNNLMVIIGNAHGTVSQ 180 Clostridium bot...
YP_003782178 104 NACIEGKgsealeEGTGKIIIKGSq-kVYSFQIENNt---------------KLSPKYLEWADDKNLLVVIGYSNGSISK 167 Clostridium lju...
WP_003357505 106 SAIVEGKgnngeeEGIGKVYLKENn-tNKLWLLKINei------------kdQKSPKFLYWIDDENLLVIIGHGYGTVSK 172 Clostridium bot...
WP_007063145 108 RACIEGKgeeaseEGIGKVFVKNTngnNFTYEIIGNn---------------KISPRDIEWVDDENLLVVIGSSQGTVSK 172 Clostridium car...
YP_006429527 116 TAYIYPDe----wETIGDIYIKDSa-sSSWLRLQLDqnyrvkmwhsfapegrYTPKKKIHWLNDNEFIIIVGFAHGIVSK 190 Desulfitobacter...
YP_001393710 110 SACIEGKgsealeEGIGKIIIKSGq-nLYSYEIENNt---------------QISPKYIEWADGKNLFVVVASSHGTLAK 173 Clostridium klu...
YP_002457879  97 TAYIYPDe----wETIGDIYIKDNv-sNRWTRLQINqenrikmwnsfapegkYTPKKKILWLNDQEFITIIGLAYGTIAK 171 Desulfitobacter...
YP_007220081 113 TAYIYPDe----wETIGDIYIKDSa-nSSWSRLQLDqeyrvrlwdyyapegkYTPKKKILWINDDEFITIIGFAHGTVSK 187 Desulfitobacter...
YP_004394946  97 SACIEGKgpdaeeEGVGEIYIKNLk-nKEMWALNLSqk------------qqKDTPKYIEWFDDNNLMVIIGSAHGTVSQ 163 Clostridium bot...
4L1N_A       145 GGILYKVNIeTGQATELYNTKDNKKQVVYAVKKg-----dKIDVQILVYEDDdlLESHEETKTITV 205 Clostridium novyi NT
WP_003375405 181 GGNLYKLDInTGETNEIYNTKDKKKQVLSVKRHg-----dKLNLNIIVYENDdlLDSHKESKTIDI 241 Clostridium botulinum
YP_003782178 168 GGDLYMLNVdTGDNEILIKMPSKKQQIVSAEKNg-----dIVNLKVNVYDDDvyNKCHVENWTINS 228 Clostridium ljungdahlii ATCC ...
WP_003357505 173 GGNLYCINVkNDTITPVYEAKDNKHEVISAEKVkdnsgktSLILTLNVYEDDnfIKSHKEKITISS 238 Clostridium botulinum
WP_007063145 173 GGNLYMLNVsTGNVSTIIETSDKKQQIMSAKKAn-----nNISLKVNVYEDDnyNKSHIENWTIHS 233 Clostridium carboxidivorans
YP_006429527 191 GGELVKVTRaTGKAEILYPAYQKLNQEVVDFEQvg----dDLVLYINLMDVNg-FCIEKGEIRVPL 251 Desulfitobacterium dehalogena...
YP_001393710 174 GGDLYMLNVnTGEVSLLIKDSNKKQQIMSVQKDg-----nNINLKVNIYDDDayNESHVEDWVITP 234 Clostridium kluyveri DSM 555
YP_002457879 172 GGELVKVTPaTGEAETLYPAYQKLNQEVIDFEQve----eELIITIDHLDANg-FCLEKEEMRVPL 232 Desulfitobacterium hafniense ...
YP_007220081 188 GGELVKIHRaAGKGEILYPADHKLNQEVIDFEQig----dDLVLNINLIDANg-FCLEKSEMRVPL 248 Desulfitobacterium dichloroel...
YP_004394946 164 GGNLYKVNVnTGETTEIYNTKDKKRQVLSAKLNg-----dKLNLNILVYENDdlLDSHKESKTINI 224 Clostridium botulinum BKT015925
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap