1DV0,1OQY,1F4I


Conserved Protein Domain Family
UBA2_HR23A

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cd14427: UBA2_HR23A 
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UBA2 domain of UV excision repair protein RAD23 homolog A (HR23A) found in vertebrates
HR23A, also called Rad23A, is a DNA repair protein that binds to 19S subunit of the 26S proteasome and shuttles ubiquitinated proteins to the proteasome for degradation which is required for efficient nucleotide excision repair (NER), a primary mechanism for removing UV-induced DNA lesions. HR23A also plays a critical role in the interaction of HIV-1 viral protein R (Vpr) with proteasome, especially facilitating Vpr to promote protein poly-ubiquitination. HR23A contains an N-terminal ubiquitin-like (UBL) domain that binds proteasomes and two C-terminal ubiquitin-associated (UBA) domains that bind ubiquitin or multi-ubiquitinated substrates. In addition, it has a XPC protein-binding domain that might be necessary for its efficient NER function. This model corresponds to the UBA2 domain.
Statistics
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PSSM-Id: 270610
Aligned: 9 rows
Threshold Bit Score: 66.1663
Created: 26-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DV0_A         3 QEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQN 43  human
1OQY_A       324 QEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQN 364 human
NP_001003739 318 QEKEAIERLKALGFSEALVVQAYFACEKNENLAANFLLNQN 358 zebrafish
EEC14682     349 QDKEAIERLKALGFPEYLVIQAYFACDKNENLAANFLLSQN 389 black-legged tick
EDO33653     320 VEKEAIERLKQLGFPEPLVIQAYFACEKNENLAANFLLNQG 360 starlet sea anemone
EFX90253     338 QDKEAIERLKALGFPEHLVVQAYFACEKNENLAANFLLSQN 378 common water flea
NP_726561    300 QDKDAIERLKALGFPEALVLQAYFACEKNEEQAANFLLSSS 340 fruit fly
1F4I_A         1 QEKEAIERLKALGFEESLVIQAYFACEKNENLAANFLLSQN 41  human
XP_003643857 167 QEKEAIERLKALGFPESLVIQAYFACEKNENLAANFLLSQN 207 chicken
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