1IFY,1QZE,1OQY


Conserved Protein Domain Family
UBA1_HR23A

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cd14425: UBA1_HR23A 
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UBA1 domain of UV excision repair protein RAD23 homolog A (HR23A) found in vertebrates
HR23A, also called Rad23A, is a DNA repair protein that binds to 19S subunit of the 26S proteasome and shuttles ubiquitinated proteins to the proteasome for degradation which is required for efficient nucleotide excision repair (NER), a primary mechanism for removing UV-induced DNA lesions. HR23A also plays a critical role in the interaction of HIV-1 viral protein R (Vpr) with proteasome, especially facilitating Vpr to promote protein poly-ubiquitination. HR23A contains an N-terminal ubiquitin-like (UBL) domain that binds proteasomes and two C-terminal ubiquitin-associated (UBA) domains that bind ubiquitin or multi-ubiquitinated substrates. In addition, it has a XPC protein-binding domain that might be necessary for its efficient NER function. This model corresponds to the UBA1 domain.
Statistics
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PSSM-Id: 270608
Aligned: 5 rows
Threshold Bit Score: 65.5276
Created: 23-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1IFY_A         7 EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 46  human
1QZE_A       167 EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 206 human
1OQY_A       167 EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 206 human
NP_001003739 160 EYDAMLTNIMSMGYERDKVVAALKASYNNPHRAVEYLLNG 199 zebrafish
XP_003643857  15 EYETMLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTG 54  chicken
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