Conserved Protein Domain Family
UBA_HERC1

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cd14401: UBA_HERC1 
UBA domain found in probable E3 ubiquitin-protein ligase HERC1 and similar proteins
HERC1, also called HECT domain and RCC1-like domain-containing protein 1, or p532, or p619, is an ubiquitously expressed multi-domain protein involved in ubiquitin-dependent intracellular membrane trafficking through its interaction with vesicle coat proteins such as clathrin and ARF. Moreover, it has been identified as a tuberous sclerosis complex TSC2-interacting protein that may play a role in TSC-mTOR (mammalian target of rapamycin) pathway. In addition to a ubiquitin-association (UBA) domain, HERC1 contains more than one RCC1-like domains (RLDs) and a C-terminal HECT E3 ubiquitin ligase domain. At this point, it may function as both E3 ubiquitin ligases and guanine nucleotide exchange factors (GEFs).
Statistics
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PSSM-Id: 270584
Aligned: 13 rows
Threshold Bit Score: 72.032
Created: 22-Jan-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q15751       2753 IAVPLLEMGFSlRQIAKAMEATGarge----adaQNITVLAMWMIEHP 2796 human
XP_413753    2752 IAVPLLEMGFSlRQIAKAMEATGarge----adaQNITVLAMWMIEHP 2795 chicken
XP_001637645  378 FTVPLLEMGFSrRHVLHAMQATGtrpg----adtRMINVMVTWLLEHT 421  starlet sea anemone
XP_002602062 1849 IAPQLLEMGFTmKHIQRAIAATGsrgd----adpRRVAVLATWMVEHP 1892 Florida lancelet
EEZ98478     2258 IVSHLLEMGFLlPHITAAMKATQssge----fnaQTANMLAVWMLEHP 2301 red flour beetle
XP_002934599 2739 VVVPLLEMGFSiRQIKKAMEATGare-----adpQNITVLAMWMIEHP 2781 western clawed frog
XP_001942852 2286 IAIPLIEMGFStRLVQRAIAALGniwet--mprnVAINSLATWMIEHP 2331 pea aphid
XP_796864    2432 IAGPLLEMGFTiQHIHKAMEVTGtsge----ldpERISVLATWMLEHP 2475 purple urchin
EKC21653      572 IAAPLLEMGFTiQAIKKAIRETSvngr---evsaSGINTLAMWMLEHP 616  Pacific oyster
ELU01327     1859 VAAPLLDMGFSlPHIMTALDSTGtsre----lraSSVNALATWMIDHP 1902 Capitella sp. I Grassle & Grassle, 1976
XP_002123770 2206 IMQQLLEMGFCrQHITRAVQETDynqventtnvsRVVGLLASWMIDHP 2253 Ciona intestinalis
CAF87526       18 IAVPLLEMGFSlRQITKALEATGarge----adaQNITVLAMWMIEHP 61   spotted green pufferfish
XP_003200872 2678 VPVRLLEMGFSmRHIYRAMEAAGvtge----vdsRTIEVLASWMLEHP 2721 zebrafish
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