2LBC


Conserved Protein Domain Family
UBA1_UBP13

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cd14384: UBA1_UBP13 
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UBA1 domain found in ubiquitin carboxyl-terminal hydrolase 13 (UBP13)
UBP13, also called deubiquitinating enzyme 13, Isopeptidase T-3 (isoT3), ubiquitin thioesterase 13, or ubiquitin-specific-processing protease 13, is an ortholog of UBP5 implicated in catalyzing hydrolysis of various ubiquitin (Ub)-chains. It contains a zinc finger (ZnF) domain, a catalytic ubiquitin-specific processing protease (UBP) domain (catalytic C-box and H-box), and two ubiquitin-associated (UBA) domains. Due to the non-activating catalysis for K63-polyubiquitin chains, UBP13 may function differently from USP5 in cellular deubiquitination processes. Moreover, the zinc finger (ZnF) domain of USP13 cannot bind to Ub. Its tandem UBA domains can bind with different types of diUb but preferentially with K63-linked.USP13 can also regulate the protein level of CD3delta in cells via its UBA domains. This model corresponds to the UBA1 domain.
Statistics
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PSSM-Id: 270567
Aligned: 4 rows
Threshold Bit Score: 95.0887
Created: 27-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2LBC_A         1 DIDESSVMQLAEMGFPLEACRKAVYFTGNMGAEVAFNWIIVHMEEPDFA 49  human
F1QFS9       635 EIDESSVMQLAEMGFPLEACRKAVYYTGNMGAEMAFNWIIAHMEEPDFA 683 zebrafish
E1BY77       647 DIDESSVMQLAEMGFPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFA 695 chicken
XP_002931622 633 DIDESSVMQLAEMGFPLEACRKAVYYTGSMGAEVAFNWIIAHMEEPDFA 681 western clawed frog
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