1DV0


Conserved Protein Domain Family
UBA2_Rad23

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cd14380: UBA2_Rad23 
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UBA2 domain of Rad23 proteins found in metazoa
The family includes mammalian orthologs of yeast nucleotide excision repair (NER) proteins, Rad23p (in Saccharomyces cerevisiae) and Rhp23p (in Schizosaccharomyces pombe). Rad23 proteins play dual roles in DNA repair as well as in proteosomal degradation. They have affinity for both the proteasome and ubiquitinylated proteins and participate in translocating polyubiquitinated proteins to the proteasome. Rad23 proteins carry a ubiquitin-like (UBL) and two ubiquitin-associated (UBA) domains, as well as a xeroderma pigmentosum group C (XPC) protein-binding domain. UBL domain is responsible for the binding to proteasome. UBA domains are important for binding of ubiquitin (Ub) or multi-ubiquitinated substrates which suggests Rad23 proteins might be involved in certain pathways of ubiquitin metabolism. Both UBL domain and XPC-binding domain are necessary for efficient NER function of Rad23 proteins. This model corresponds to the UBA2 domain.
Statistics
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PSSM-Id: 270563
Aligned: 9 rows
Threshold Bit Score: 69.4821
Created: 25-Feb-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DV0_A         3 QEKEAIERLKALGFpESLVIQAYFACEKNENLAANFLLS 41  human
XP_003390667 302 EEREAIDRLKALGFpEGEVIQAYLACDKNETLAANLLLS 340 Amphimedon queenslandica
EFO15597     277 AERDAINRLKSMGFpEQLVIEAYFACDKNEDLAANYILA 315 Loa loa
CBY20762     310 EDRASIERLKELGFpEQAVLQAFFACDKNENDAANFLLS 348 Oikopleura dioica
XP_001176797 427 EERDAIERLKGLGFpEELVIQAYFACDKNENLAANFLLH 465 purple urchin
P54727       365 QEKEAIERLKALGFpEGLVIQAYFACEKNENLAANFLLQ 403 human
XP_002606011 270 QEKEAIERLKALGFdEGLVIQAYFACDKNENLAANFLLS 308 Florida lancelet
ABC60029     308 EERAAVDRLKALGFpEELVIQAYYACEKNEDAAANFLLS 346 Schistosoma mansoni
EDV23105     345 EEKEAIDRLKALGFdEGLVVQAYFACDKNENLAANFLLQ 383 Trichoplax adhaerens
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