Conserved Protein Domain Family
UBA1_Rhp23p_like

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cd14378: UBA1_Rhp23p_like 
UBA1 domain of Schizosaccharomyces pombe UV excision repair protein Rhp23p and its homologs
The subfamily contains several fungal multi-ubiquitin receptors, including Schizosaccharomyces pombe Rhp23p and Saccharomyces cerevisiae Rad23p, both of which are orthologs of human HR23A. They play roles in nucleotide excision repair (NER) and in cell cycle regulation. They also function as shuttle proteins transporting ubiquitinated substrates destined for degradation from the E3 ligase to the 26S proteasome. For instance, S. pombe Rhp23p forms a complex with Rhp41p to recognize photolesions and help initiate DNA repair, and it also protects ubiquitin chains against disassembly by deubiquitinating enzymes. Like human HR23A, members in this subfamily interact with the proteasome through their N-terminal ubiquitin-like domain (UBL), and with ubiquitin (Ub), or multi-ubiquitinated substrates, through their two ubiquitin-associated domains (UBA), termed internal UBA1 and C-terminal UBA2. In addition, they contain a xeroderma pigmentosum group C (XPC) protein-binding domain that might be necessary for its efficient NER function. This model corresponds to the UBA1 domain.
Statistics
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PSSM-Id: 270561
Aligned: 7 rows
Threshold Bit Score: 86.7431
Created: 8-Jan-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O74803     141 LAVGAQRNVAVENMVEMGYeRSEVERAMRAAFNNPDRAVEYLLTGIP 187  Schizosaccharomyces pombe 972h-
CCJ30877  1165 LVVGLLCDTAIKNMMEMGYeRTQVENAMRAAFNNPDRAVEYLLTGIP 1211 Pneumocystis jirovecii
P32628     142 FVVGTERNETIERIMEMGYqREEVERALRAAFNNPDRAVEYLLMGIP 188  Saccharomyces cerevisiae S288c
EEC14682   169 LVMGEDYQRMVSQIMEMGYdKPQVERALRASFNNPDRAVEYLLTGGN 215  black-legged tick
NP_651918  153 LLMGDEYNQTVLSMVEMGYpREQVERAMAASYNNPERAVEYLINGIP 199  fruit fly
EFX90253   131 LIVGDDYNQMVQNIMDMGYpRDQVERALRASFNNPDRAVEYLLTGIP 177  common water flea
BAM19254   132 ISAELDFESTVQSIMDMGYnRQQVEQALRASFSNRERAVEYLITGIP 178  Papilio polytes
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