1TR8


Conserved Protein Domain Family
UBA_AeNAC

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cd14359: UBA_AeNAC 
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UBA-like domain found in archaeal nascent polypeptide-associated complex homolog from Methanothermobacter marburgensis (AeNAC) and similar proteins
AeNAC is a functional archaeal homolog of eukaryotic nascent polypeptide-associated complex (NAC). Both AeNAC and eukaryotic NAC function as the cytosolic chaperone that can bind to ribosomal RNA, interact with the nascent polypeptide chains as they emerge from the ribosome, and assist in post-translational processes. They all contain a NAC domain and an ubiquitin-associated (UBA) domain in the C-terminus. However, unlike eukaryotic NAC, AeNAC forms a ribosome associated homodimer, but not heterodimer. The NAC domain of AeNAC is responsible for the homodimer formation.
Statistics
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PSSM-Id: 270542
Aligned: 28 rows
Threshold Bit Score: 47.9874
Created: 26-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1TR8_A        63 EIPEDDIELVXNQTGaSREDATRALQETgGDLAEAIXRLS 102 Methanothermobacter marburgensis
YP_001738044  73 SPSEEDVMLVAAQAGvDPDRARRALIETrGDLAEAIIRLK 112 Candidatus Korarchaeum cryptofilum OPF8
Q57728        83 EITEEDVELVAKQCNvSKEEARKALEECnGDIAEAILKLE 122 Methanocaldococcus jannaschii DSM 2661
YP_843021     73 RVSPSDVELVASQTGaSPEEARAALMDCgGDLAEAIIKLS 112 Methanosaeta thermophila PT
Q9YFQ1        75 EITEEDVALVAEQAGvSMEEARKALEESgGDIAEAILRLK 114 Aeropyrum pernix K1
O59193        71 NISEEDIKLVMEQAGvDYETAKKALEETgGDLAEAILRLT 110 Pyrococcus horikoshii OT3
O30024        69 KISEDDIKLIMEQANvDEETARRALEEAgGDLAEALMKLQ 108 Archaeoglobus fulgidus DSM 4304
ABX13498      72 IFSEEDIQLVSQQAGvDEEKAKAALEEAkGDLARAILLLT 111 Nitrosopumilus maritimus SCM1
AGI48335      84 VFADEDIELVMSQTGcDREKAVKALEECdGQPAEAIIKIM 123 Thermoplasmatales archaeon BRNA1
Q5V5C9        91 GVDEDDVELVAMRAGvDEDTAREALEANdGDLADAVDELE 130 Haloarcula marismortui ATCC 43049
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