3B0F,1Q02,2JY7,2K0B,2RRU


Conserved Protein Domain Family
UBA_SQSTM

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cd14320: UBA_SQSTM 
Click on image for an interactive view with Cn3D
UBA domain of sequestosome-1 (SQSTM) and similar proteins
SQSTM, also called EBI3-associated protein of 60 kDa (EBIAP /p60), phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa, or ubiquitin-binding protein p62, is a widely expressed multifunctional cytoplasmic protein that is able to noncovalently bind ubiquitin and several signaling proteins, suggesting a regulatory role connected to the ubiquitin-proteasome pathway. It functions as a scaffolding protein that regulates a diverse range of signaling pathways leading to activation of the nuclear factor kappa B (NF-kappaB) family of transcription factors. It also plays a novel role in connecting receptor signals with the endosomal signaling network required for mediating TrkA-induced differentiation. SQSTM contains a PB1 dimerization domain, a tumor necrosis factor receptor-associated factor 6 (TRAF6) binding site, and a C-terminal ubiquitin-associated (UBA) domain that mediates the recognition of polyubiquitin chains and ubiquitylated substrates.
Statistics
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PSSM-Id: 270505
Aligned: 31 rows
Threshold Bit Score: 64.9047
Created: 23-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
polypeptide
Conserved site includes 13 residues -Click on image for an interactive view with Cn3D
Feature 1:polypeptide substrate binding site [polypeptide binding site]
Evidence:
  • Structure:3B0F; Mus musculus P62 in complex with ubiquitin through its UBA domain, contact at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   ###  ####  ##  #          ###
3B0F_A        10 RLIESLSQMLSMGFsDEGGWLTRLLQTKNYDIGAALDTIQ 49  house mouse
2K0B_X         9 RLIESLSQMLSMGFsDEGGWLTRLLQTKNYDIGAALDTIQ 48  human
2RRU_A        10 RLIESLSQMLSMGFsDEGGWLTRLLQTKNYDIGAALDTIQ 49  house mouse
NP_998338    309 RLVESLSQMLSMGFtDEGGWLTRLLHTKNYDIGGALDTIQ 348 zebrafish
AAX09928     375 KLNEAIRQMENMGFnNDSGWLTQLLISKDFDIGKVIDTLQ 414 moon jelly
EAW52088     127 WLLQPLSQMQSMGLsDEGGCLIRLLDTRNYHIRAALDIIQ 166 human
NP_001079920 407 RLIETLSQMLSMGFsDEGGWLTRLLEAKQYDIGSALDAMQ 446 African clawed frog
XP_001639077 384 PLEVAIAQMRAMGFeDDSGWLAQLIKSKEYDIGKVLDAIQ 423 starlet sea anemone
AFJ51386     406 RLIESLSQMLSMGFsDTGGWLTHLLHSKNYDIGAALDAIQ 445 eastern diamondback rattlesnake
XP_002128842 283 RLAESLTQLLAMGFnNDGGWLANLLCACDYDISRALDKMQ 322 Ciona intestinalis

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