2O25


Conserved Protein Domain Family
UBA_II_E2_UBE2K_like

?
cd14313: UBA_II_E2_UBE2K_like 
Click on image for an interactive view with Cn3D
UBA domain found in vertebrate ubiquitin-conjugating enzyme E2 K (UBE2K), Drosophila melanogaster ubiquitin-conjugating enzyme E2-22 kDa (UbcD4) and similar proteins
UBE2K, also called Huntingtin-interacting protein 2 (HIP-2), ubiquitin carrier protein, ubiquitin-conjugating enzyme E2-25 kDa (E2-25K), or ubiquitin-protein ligase, is a multi-ubiquitinating enzyme with the ability to synthesize Lys48-linked polyubiquitin chains which is involved in the ubiquitin (Ub)-dependent proteolytic pathway. It interacts with the frameshift mutant of ubiquitin B and functions as a crucial factor regulating amyloid-beta neurotoxicity. It has also been characterized as Huntingtin-interacting protein that modulates the neurotoxicity of Amyloid-beta (Abeta), the principal protein involved in Alzheimer's disease pathogenesis. Moreover, E2-25K increases aggregate the formation of expanded polyglutamine proteins and polyglutamine-induced cell death in the pathology of polyglutamine diseases. UbcD4, also called ubiquitin carrier protein, or ubiquitin-protein ligase, is encoded by Drosophila E2 gene which is only expressed in pole cells in embryos. It is a putative E2 enzyme homologous to the Huntingtin interacting protein-2 (HIP2) of human. UbcD4 specifically interacts with the polyubiquitin-binding subunit of the proteasome. This family also includes a putative ubiquitin conjugating enzyme from plasmodium Yoelii (pyUCE). It shows a high level of sequence similarity with UBE2K and may also plays a role in the ubiquitin-mediated protein degradation pathway. All family members are class II E2 conjugating enzymes which contain a C-terminal ubiquitin-associated (UBA) domain in addition to an N-terminal catalytic ubiquitin-conjugating enzyme E2 (UBCc) domain.
Statistics
?
PSSM-Id: 270498
Aligned: 12 rows
Threshold Bit Score: 57.7168
Created: 5-Apr-2013
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
polypeptide
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:polypeptide substrate binding site [polypeptide binding site]
Evidence:
  • Structure:2O25; Homo sapiens ubiquitin-conjugating enzyme E2-25 kDa in complex with Sumo-1- conjugating enzyme Ubc9, contacts at 4A.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1                ####                #  #   #
2O25_A       165 TKKIENLCAMGFdRNAVIVALSSKsWDVETATELLL 200 human
P52486       163 DSKIQRLRDMGIdEHEARAVLSKEnWNLEKATEGLF 198 fruit fly
XP_002645394 142 KSVVDQLVDMGFpVHAAIIALSNSeWNAEHASEELL 177 Caenorhabditis briggsae
XP_003381856 156 NKKVQKIVDMGMsKDDAITALSHSrWDVSQAIEYLF 191 Trichinella spiralis
EDQ85082     203 EELVQKLVDMGTsRDKAIVALSSSdWTLERAVERAF 238 Monosiga brevicollis MX1
ADY43505     164 WKKVDKLVDMGVsQDQAISALSCNqWDLSKATDYVF 199 pig roundworm
XP_002125172 162 MDKLKKVTEMGFyRDPSLRALSSNsWNLADALDNIG 197 Ciona intestinalis
P52484       178 NRKVGRLIEMGIrETEAIVYLSCNnWKLEQALQFIF 213 Caenorhabditis elegans
NP_509501    139 KKKVDSLIEMGFsRLESILALGGSdWNLADAAEQLL 174 nematode
NP_497174    163 QALVDKLKDMGVrEEEAVSVLSCNnWDINRSTVYIF 198 nematode
CCD76999     189 VDLVDKLVQMGFdEHEACRALSMKnWDLAMATEHLI 224 Schistosoma mansoni
XP_002587797 165 YDKVSQLAEMGFdRHKALTALSAHeWNMERATQDLI 200 Florida lancelet

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap