Conserved Protein Domain Family
UBA_VP13D
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cd14306: UBA_VP13D 
UBA domain found in vacuolar protein sorting-associated protein 13D (VP13D) and similar proteins
VP13D is a chorea-acanthocytosis (CHAC)-similar protein encoded by gene VPS13D. it contains two putative domains, ubiquitin-associated (UBA) domain and lectin domain of ricin B chain profile (ricin-B-lectin), suggesting it may interact with, and be involved in the trafficking of, proteins modified with ubiquitin and/or carbohydrate molecules. Further investigation is required.
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Statistics
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PSSM-Id: 270491
Aligned: 38 rows
Threshold Bit Score: 50.1338
Created: 8-Aug-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q5THJ4       2642 LARLQELGFsMDDCRKALLACq-GQLKKAASWLFKNA 2677 human
XP_003079389  317 VQMLMGMGFtKKHCLDALDTCg-GDIEECVEWLMTNC 352  Ostreococcus tauri
EEY61198     2479 VQQMMEMGFpKEWCDVALARCs-QNVEAAINFCFEHS 2514 Phytophthora infestans T30-4
EEY61198     2550 LEQLSEMGFpFNWCKKALAANr-NNVDAALTWILSNG 2585 Phytophthora infestans T30-4
EJK68535     2531 LRQLEEMGFpRHWCVEALSATr-NNVDEALTWILTNG 2566 Thalassiosira oceanica
CBN78362     4098 TAHMAEMGFpIHWCERALAETg-DDIEAALNWILSNG 4133 Ectocarpus siliculosus
EDO06796      631 LQQLMAMGFqEKLCRLAMEREgnDNIDTCVNWILSNM 667  Babesia bovis T2Bo
XP_002908723  260 VEELMLMGFpEDWCVLALKQTe-NDIVNASAWIVDNL 295  Phytophthora infestans T30-4
XP_003093384  144 VRKVEEMGFpTKDAIIALSECe-WKVEEAAVQLIDQA 179  Caenorhabditis remanei
CCD59048      303 LRLMEEMGFaRDLAIVALEQTg-WNANEAVNLVIATS 338  Schistosoma mansoni
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