Conserved Protein Domain Family
UBA_PUB_plant

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cd14290: UBA_PUB_plant 
UBA domain found in plant PNGase/UBA or UBX (PUB) domain-containing proteins
This family includes some uncharacterized hypothetical proteins found in plants. Although their biological function remain unclear, all family members contain an N-terminal ubiquitin-associated (UBA) domain and a C-terminal PUB domain. UBA domain, along with UBL (ubiquitin-like) domain, has been implicated in proteasomal degradation by associating with substrates destined for degradation as well as with subunits of the proteasome, thus regulating protein turnover. PUB domain functions as a p97 (also known as valosin-containing protein or VCP) adaptor by interacting with the D1 and/or D2 ATPase domains. The type II AAA+ ATPase p97 is involved in a variety of cellular processes such as the deglycosylation of ERAD substrates, membrane fusion, transcription factor activation and cell cycle regulation through differential binding to specific adaptor proteins.
Statistics
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PSSM-Id: 270476
Aligned: 8 rows
Threshold Bit Score: 78.6372
Created: 12-Apr-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAU44584      11 EVNHGLLKELEDMGFSmARAAWALHHSGn-sSLEAAVNWIIDHENESQFE 59  thale cress
EFN54376     110 EVNADLLKQMEEMGFPaARATRALYHSGg-eNLEAAVGWLEEHQGDADLD 158 Chlorella variabilis
EIE21636     118 TVNADLLQQLQDMGFPkNRSVRALHSTGt-dNIEQAVSWIVEHEEDADLD 166 Coccomyxa sp. C-169
EDP09322      99 EVPENLLKEMEEMGFGrNRAIRAIWFSKavtSVEAAVNWLMDHDTDPGID 148 Chlamydomonas reinhardtii
EEH53598     139 EVDAALVAEIEAMGFTrNKAVRAIHTTGt-tSVEQAVNWIVEHAEDVELI 187 Micromonas pusilla CCMP1545
EFJ22008     104 EVNQQLLEELEAMGFPrARSVRSLFYSKa-eNLEGAVNWIVEHENDPDID 152 Selaginella moellendorffii
XP_004163175   5 EVKQKLMSEVEALGFPrARVVRALHSTGn-vSSEAAVHWLIDHENDPDID 53  cucumber
EDQ51881     110 EVNKEALAELEAMGFPtARSTRALHFTGs-sNVETAVNWIVEHENDPDID 158 Physcomitrella patens subsp. patens
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