1DV0,2QSF


Conserved Protein Domain Family
UBA2_Rad23_like

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cd14281: UBA2_Rad23_like 
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UBA2 domain of Rad23 proteins found in eukaryotes
The Rad23 family includes the yeast nucleotide excision repair (NER) proteins, Rad23p (in Saccharomyces cerevisiae) and Rhp23p (in Schizosaccharomyces pombe), their mammalian orthologs HR23A and HR23B, and putative DNA repair proteins from plants. Rad23 proteins play dual roles in DNA repair as well as in proteosomal degradation. They have affinity for both the proteasome and ubiquitinylated proteins and participate in translocating polyubiquitinated proteins to the proteasome. Rad23 proteins carry a ubiquitin-like (UBL) and two ubiquitin-associated (UBA) domains, as well as a xeroderma pigmentosum group C (XPC) protein-binding domain. UBL domain is responsible for the binding to proteasome. UBA domains are important for binding of ubiquitin (Ub) or multi-ubiquitinated substrates which suggests Rad23 proteins might be involved in certain pathways of ubiquitin metabolism. Both UBL domain and XPC-binding domain are necessary for efficient NER function of Rad23 proteins. This model corresponds to the UBA2 domain.
Statistics
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PSSM-Id: 270467
Aligned: 48 rows
Threshold Bit Score: 48.2763
Created: 23-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DV0_A         3 QEKEAIERLKALGFp---ESLVIQAYFACEKNENLAANFLL 40  human
CCA69693     364 EEMNDIQTLQDWTGa--sRDKAAEAYLACGKNVELAANFLF 402 Piriformospora indica DSM 11827
CBN75246     298 EEDAVVQNLMAMVPga-gRDQVIEAFIACDKNAEMAANLLF 337 Ectocarpus siliculosus
EIM19097     608 EDREAIENLCAFGGf--dFEQAKQCYLACEKNTEMAANLLF 646 Wallemia sebi CBS 633.66
EAL43102     319 EDQKNITDLMELGFs---RSVATEAYIVSNKNKEVAANYLF 356 Entamoeba histolytica HM-1:IMSS
AAX79246     308 EDRAAVNRLVLLGEgawgEREATEAYRMCGRREDAAAHFLL 348 Trypanosoma brucei brucei strain 927/4 GUTat10.1
XP_003877476 360 EDRTAVQQLVELGGgmwdEQSAVLVYLATQRNQEVAASVLF 400 Leishmania mexicana MHOM/GT/2001/U1103
ELP83717     340 EDENNIKTLMGLGAs---RQLAIEAYIVCKKNMELAANYLF 377 Entamoeba invadens IP1
ELP85325     339 EDLENIQRLIELGAs---KKLATEAYVVCNKNVDAAANYIF 376 Entamoeba invadens IP1
GAC71356     131 EDRAGVEQIVAMGIp---EDKAIESFFMCGKNVEMAVQYYF 168 Pseudozyma antarctica T-34
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