1IFY


Conserved Protein Domain Family
UBA1_Rad23_like

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cd14280: UBA1_Rad23_like 
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UBA1 domain of Rad23 proteins found in eukaryotes
The Rad23 family includes the yeast nucleotide excision repair (NER) proteins, Rad23p (in Saccharomyces cerevisiae) and Rhp23p (in Schizosaccharomyces pombe), their mammalian orthologs HR23A and HR23B, and putative DNA repair proteins from plants. Rad23 proteins play dual roles in DNA repair as well as in proteosomal degradation. They have affinity for both the proteasome and ubiquitinylated proteins and participate in translocating polyubiquitinated proteins to the proteasome. Rad23 proteins carry a ubiquitin-like (UBL) and two ubiquitin-associated (UBA) domains, as well as a xeroderma pigmentosum group C (XPC) protein-binding domain. UBL domain is responsible for the binding to proteasome. UBA domains are important for binding of ubiquitin (Ub) or multi-ubiquitinated substrates which suggests Rad23 proteins might be involved in certain pathways of ubiquitin metabolism. Both UBL domain and XPC-binding domain are necessary for efficient NER function of Rad23 proteins. This model corresponds to the UBA1 domain.
Statistics
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PSSM-Id: 270466
Aligned: 30 rows
Threshold Bit Score: 62.247
Created: 23-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1IFY_A         7 EYETMLTEIMSMGYeRERVVAALRASYNNPHRAVEYLLT 45  human
O74803       146 QRNVAVENMVEMGYeRSEVERAMRAAFNNPDRAVEYLLT 184 Schizosaccharomyces pombe 972h-
XP_002169219 148 ALDSSINELMSLGFsREQVLRALQRSFQNADRAAEYLLS 186 green hydra
XP_001347399 149 KLKESIDNICAMGFeKEQVKKAMILAYNNPNRAIDYLTN 187 Plasmodium falciparum 3D7
EHY57022     147 RNESTIREMESMGFgRPEIERALRAAYFNPDRAIEYLLS 185 Exophiala dermatitidis NIH/UT8656
CAK68315     133 EYDKAIEQLMSMGFqREECVNAMKAAFNNPDRAVEYLLN 171 Paramecium tetraurelia strain d4-2
CCO18608     136 ELEKAIEELQAMGFpRDQCVAALRAAFNNPDRAVEYLLN 174 Bathycoccus prasinos
EAA29819     150 QRAEAIANMEAMGFeRSQIDAAMRAAFFNPERAVEYLLN 188 Neurospora crassa OR74A
XP_003373722 278 LDDNLVNELCMMGFrKSSVVVALKMAYNNPDVAIDYLTS 316 Trichinella spiralis
ELU39338     171 ALNSAIENMMGMGFeREQIMRALRASFNNPDRAVEYLLT 209 Rhizoctonia solani AG-1IA
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