2QNJ,2Y94,3H4J,4BL1


Conserved Protein Domain Family
UBA_AMPK-RKs

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cd14272: UBA_AMPK-RKs 
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UBA domain of AMPK related kinases
The AMPK-RK family comprises AMP-activated protein kinases (AMPKs), MAP/microtubule affinity-regulating kinases (MARKs), Brain-specific kinases (BRSKs), Salt inducible kinases (SIKs), maternal embryonic leucine zipper kinase (MELK), and SNF-related serine/threonine-protein kinase (SNRK). It is the only kinase family in the human genome containing an ubiquitin-associated (UBA) or UBA-like domain which is located immediately C-terminal to their N-terminal protein kinase catalytic domain. In addition, most of family members contain a C-terminal regulatory domain of 5'-AMP-activated protein kinase (AMPK), but some are lack of this region. AMPK-RKs play central roles in metabolic control, energy homeostasis and stress responses in eukaryotes. They require phosphorylation by liver kinase B1 (LKB1) for full activity. Normally, AMPK-RKs appear to exist as heterotrimeric complexes consisting of a catalytic alpha-subunit and regulatory beta- and gamma-subunits. This model corresponds to the catalytic subunit. The UBA domain, previously called SNF1 homology (SNH) domain, regulates the conformation, LKB1-mediated phosphorylation and activation, and localization of the AMPK-RKs, but does not interact with ubiquitin-like molecules. In AMPKalpha subunits, the UBA-like autoinhibitory domain (AID) is responsible for AMPKalpha subunit autoinhibition. Due to the lack of UBA domain, NUAK1 kinase, also called ARK5 (AMPK-related kinase 5), and NUAK2 kinase, also called SNARK (SNF1/AMPK-related kinase), are not included in this family.
Statistics
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PSSM-Id: 270458
Aligned: 12 rows
Threshold Bit Score: 32.5892
Created: 23-Jul-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2QNJ_A        286 DQKRIDIMVGMgy--sqEEIQESLSKMk-yDEITATYLLLG 323  human
2Y94_A        291 DDEALKEVCEKfec-seEEVLSCLYNRnhqDPLAVAYHLII 330  Norway rat
Q8TDC3        316 DPDVLESMASLgcfrdrERLHRELRSEe-eNQEKMIYYLLL 355  human
Q9NRH2        295 HNSIIQRMVLGdia-drDAIVEALETNr-yNHITATYFLLA 333  human
Q38997        317 DEEILQEVINMgf--drNHLIESLRNRt-qNDGTVTYYLIL 354  Arabidopsis thaliana
P57059        305 DEQALGIMQTLgv--drQRTVESLQNSs-yNHFAAIYYLLL 342  human
3H4J_B        282 DSRIVSKLGEAmgf-seDYIVEALRSDe-nNEVKEAYNLLH 320  fission yeast
4BL1_A        284 DDDCVTELSVHhrn-nrQTMEDLISLWq-yDHLTATYLLLL 322  human
EFA75551      364 DDEIVNDLVAIgy--drDEVYSNVKQNr-yNDCAATYFLLA 401  Polysphondylium pallidum PN500
AFD36249      327 DPDVVEQMESLgf--prEQALDSIVNNr-yDIAASTYYLLA 364  Acanthamoeba castellanii
Q54DF2        490 DQEIIEELVGLgf--erEELCNSIRQNk-yNDAASTYFLLQ 527  Dictyostelium discoideum AX4
XP_004356894  100 DANVIQELMNLgy--ekEEILNNVKQNk-yNDCAATYFLLC 137  Dictyostelium fasciculatum
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