Conserved Protein Domain Family
GAT_GGA_fungi

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cd14235: GAT_GGA_fungi 
canonical GAT domain found in fungal ADP-ribosylation factor (Arf)-binding proteins (GGAs)
GGAs, also called Golgi-localized gamma-ear-containing Arf-binding proteins, belong to a family of ubiquitously expressed, monomeric, motif-binding cargo/clathrin adaptor proteins that regulate clathrin-mediated trafficking of cargo proteins from the trans-Golgi network (TGN) to endosomes. Two GGAs (Gga1p and Gga2p) have been identified in the budding yeast Saccharomyces cerevisiae. Yeast GGAs play important roles in the carboxypeptidase Y (CPY) pathway, vacuole biogenesis, alpha-factor maturation, and interactions with clathrin. They have a multidomain structure consisting of VHS (Vps27/Hrs/ STAM), GAT (GGA and TOM), hinge, and GAE (gamma-adaptin ear) domains. Both Gga1p and Gga2p function as effectors of Arf in yeast. They interact with Arf1p and Arf2p in a GTP-dependent manner. Moreover, Gga2p mediates sequential ubiquitin-independent and ubiquitin-dependent steps in the trafficking of ARN1, a ferrichrome transporter in S. cerevisiae, from the TGN to the vacuole. It also acts as a phosphatidylinositol 4-phosphate effector at the Golgi exit, which binds directly to the TGN PtdIns(4)-kinase Pik1p and contributes to Pik1p recruitment. In addition, Gga2p is required for sorting of the yeast siderophore iron transporter1 (Sit1) to the vacuolar pathway. The GAT domain of GGAs interacts with class I GTP-bound form of Arf proteins, Rabaptin-5, ubiquitin, and/or the tumor susceptibility gene 101 product (TSG101).
Statistics
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PSSM-Id: 410583
Aligned: 27 rows
Threshold Bit Score: 99.2225
Created: 6-Sep-2012
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
putative
Feature 1:putative ubiquitin binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding of human GGA3 GAT domain to ubiquitin
  • Comment:GGAs play important roles in ubiquitin-dependent sorting of cargo proteins both in biosynthetic and endocytic pathways.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                   #  ##  #  ##           ## ##  ##  #                                  
P38817       235 QAKQAISSELNKLKRKADLLNEMLESpd---sqNWDNETTQELHSALKVAQPKFQKIIEEEqe-ddALVQDLLKFNDTVN 310 Saccharomyces c...
Q6C7L1       241 NYAAKAAEDLEKIKTKAQLLDEMMQGhps-gtpFKPDDVYAEMYSAVKAAHPRIQKMTEEEgq-deETVAKLLQLNDYLH 318 Yarrowia lipoly...
Q7S5I2       234 DYRAKAAEDVGKIQQKARLLEERLEAfqp-gdkIVDGDVFSELAAALSSAQPKIQKMCEEEsd-dhEAVAKLLEINDSIH 311 Neurospora crassa
XP_002839524 228 DYRAKAAEEIGKLREKARLLEEMLGKvhk-getIGQQDTFEELASALKTAQPKIQKIIEEEge-dpDAVVKLLELNDVIN 305 Tuber melanospo...
EIW65480     226 DYASQTLSELDKVQSKAILLNDMLNNaregekiGIEGDVYDQVAMACRGARPKIQRWIEEEdgereGMMDRLLLCNDLIN 305 Tremella mesent...
EIM22100     592 DYRAQTIKELEKVQHKAILLNDMLDQaahtqekLVRGDAYDQVSSLCKQASPKLQKWISEAsesesDLLERLLQINDLIN 671 Wallemia sebi C...
EIF47627     220 QTKKKVESELEKVGRKADLLNEMLDNatnagkiDSEDDTLYDLISAVRVARPKLQKIISEEsg-ddDAVAKLLALNDKLN 298 Dekkera bruxell...
ACZ80666     223 DYSAQTLKELDKVQSKALLLDDMLNNavkgekiGLDGDVYDQVATACKGARPKIQKWIEDDhg-fkESMMDLISFDAAVS 301 Filobasidiella ...
EGF81418     239 DYKKEVNQEIERIESRIILLNDMLNQrrp-gesLAADSTIEELYGTAKSAQTKLQSFIELNdd--eDRLARLLELNDLIN 315 Batrachochytriu...
EMR08792     219 NYRAKVAEDIEKIRRKTFLLQEMLKKnnk--dtIYKSDICEDFISSIKNAQPKIRKILEQEkn-dtEAISKLLELNDMIN 295 Pneumocystis mu...
Feature 1                      
P38817       311 QLLEKFNLLKNGDS 324 Saccharomyces cerevisiae S288c
Q6C7L1       319 SLVEKFELLRKGDF 332 Yarrowia lipolytica
Q7S5I2       312 RTVERYRLLKKGDI 325 Neurospora crassa
XP_002839524 306 TTVERYNFVKRGDL 319 Tuber melanosporum Mel28
EIW65480     306 NALDRFEACKAGDW 319 Tremella mesenterica DSM 1558
EIM22100     672 NVLNRYNAFKNGDY 685 Wallemia sebi CBS 633.66
EIF47627     299 AVLKKSDLLTGGHA 312 Dekkera bruxellensis AWRI1499
ACZ80666     302 ENVTSPDFPGMTIA 315 Filobasidiella depauperata
EGF81418     316 IVLQKYSDVKSGKA 329 Batrachochytrium dendrobatidis JAM81
EMR08792     296 VTILQYGKTNEEKA 309 Pneumocystis murina B123

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