Conserved Protein Domain Family
GAT_GGA-like_plant

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cd14231: GAT_GGA-like_plant 
canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants
The family includes a group of uncharacterized plant proteins containing an N-terminal VHS (Vps27p/Hrs/STAM)-domain and a GAT (GGA and TOM1) domain. Both domains are also present in Golgi-localized gamma ear-containing Arf-binding proteins (GGAs), which belong to a family of ubiquitously expressed, monomeric, motif-binding cargo/clathrin adaptor proteins that regulate clathrin-mediated trafficking of cargo proteins from the trans-Golgi network (TGN) to endosomes. In contrast to GGA proteins, members in this family do not have either a GAE (gamma-adaptin ear homology) domain or a clathrin-binding motif. The canonical GAT domain is a monomeric three-helix bundle that binds ubiquitin.
Statistics
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PSSM-Id: 410579
Aligned: 23 rows
Threshold Bit Score: 99.2574
Created: 6-Sep-2012
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
putative
Feature 1:putative ubiquitin binding site [polypeptide binding site]
Evidence:
  • Comment:based on the binding to ubiquitin of other members of the family, human GGA3 and human TOM1

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          ##  ## ##  ##  #            #  ##                                            
Q9LPL6       188 EIQSAQGSVDVLTDMLGALdpshpeGLKEELIVDLVEQCRTYQRRVMALVNTTsDEELMCQGLALNDNLQRVLQHHDDK 266 thale cress
Q9FFQ0       186 ILQKASTALEILKEVLDAVdsqnpeGAKDEFTLDLVEQCSFQKERVMHLVMTSrDEKAVSKAIELNEQLQRILNRHEDL 264 thale cress
NP_001151587 195 GLNNIRNATELLYDMVNALnpadrmAVKDEIIADLVNQCRSNQQKLMQFVSSTgDEDLLKQGLELNDRLQSVLTRHDAI 273 maize
BAJ91795     149 DLQRILSAAELLSEMLREVnpndheAVNDEIIAELVNQCRSYQKKIMSLVSSVsDEDLLSQSLDLNDRLQILLSKHDAI 227 domesticated barley
XP_024357862  95 DIKNAQNLVELLQDMILALnprdrmSAKEEVIVELVDQCRVNQRRVMQLVNISsDEDLLCQGLALNDELQRVLARYDAF 173 Physcomitrella p...
NP_001149290 185 IVQKASSVMEVLRDVLNSMdprhpeGATDEFVLDLVEQCTFQKQRIMHLVMTSrDETLVSQAIELNEELHKVLVRHDAL 263 Zea mays
XP_022839141 304 DVAVARHSLETFTSVLDACvat-ttPAPSEISRELATQCRAMHPRLIELISNAeDEGLLMSAIELNDALTRQIERFDLL 381 Ostreococcus tauri
XP_002978179 187 DIDTARGRVEVLLEMLNAVnprdkqAIKDELIVELVEQCRSTQQRVMHLVNNTsDEELLRQGLGLNDDLQKVLEKHDAI 265 Selaginella moel...
O80910       237 SIESMRDVMDLLGDMLQAVdpsdreAVKDEVIVDLVERCRSNQKKLMQMLTSTgDDELLGRGLDLNDSLQILLAKHDAI 315 thale cress
F4KAU9       209 SLESMRNVMDLVNDMVQAVnpsdksALKDELIVDLVEQCRSNQKKLIQMLTTTaDEDVLARGLELNDSLQVVLARHDAI 287 thale cress

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