3BEG,1WBP


Conserved Protein Domain Family
STKc_SRPK1

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cd14216: STKc_SRPK1 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine Kinase, Serine-aRginine Protein Kinase 1
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SRPK1 binds with high affinity the alternative splicing factor, SRSF1 (serine/arginine-rich splicing factor 1), and regiospecifically phosphorylates 10-12 serines in its RS domain. It plays a role in the regulation of pre-mRNA splicing, chromatin structure, and germ cell development. SRPKs phosphorylate and regulate splicing factors from the SR protein family by specifically phosphorylating multiple serine residues residing in SR/RS dipeptide motifs (also known as RS domains). Phosphorylation of the RS domains enhances interaction with transportin SR and facilitates entry of the SR proteins into the nucleus. SRPKs contain a nonconserved insert domain, within the well-conserved catalytic kinase domain, that regulates their subcellular localization. The SRPK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 271118
Aligned: 5 rows
Threshold Bit Score: 540.388
Created: 19-Aug-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      #####   #            # #                                   #   
3BEG_A     12 LVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQgKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLL 91  human
1WBP_A     28 LVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQgKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLL 107 human
AAH56825   71 HVKIGDLLNSKYHVIRKLGWGHFSTVWLAWDIQgKRFVAMKVVKSAEHYTETALDEIKLLRSVRNTDPDDPNREMVVQLL 150 zebrafish
AAH72199   69 HVKIGDLFCGRYHVIRKLGWGHFSTVWLSWDLQtKRFVAMKVVKSAEHYTETALDEIKLLRSVRNTDPNDPNRERVVQLL 148 African clawed frog
XP_419265 160 LVKIGDLFNGRYHVIRKLGWGHFSTVWLAWDIQgKRFVAMKVVKSAEHYTETALDEIKLLKSVRNSDPNDPNKERVVQLL 239 chicken
Feature 1                     ####  #                                         # # ## #        
3BEG_A     92 DDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYI 171 human
1WBP_A    108 DDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYI 187 human
AAH56825  151 DDFKISGVNGTHVCMVFEVLGHHLLKWIIKSNYQGLPLPCVKSIIRQVLQGLDYLHTKCQIIHTDIKPENILMSVEELYV 230 zebrafish
AAH72199  149 DDFKISGANGTHVCMVFEVLGHHLLKWIIKSNYQGLPLPCVKNIIRQVLQGLDYLHSRCQIIHTDIKPENILLSVSEVYI 228 African clawed frog
XP_419265 240 DDFKISGVNGSHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIKQVLQGLDYLHTKCRIIHTDIKPENILLCVNDQYI 319 chicken
Feature 1                                                                                     
3BEG_A    172 RRLAAEATEWQRsgapppsgsa---------------------------------------------------------- 193 human
1WBP_A    188 RRLAAEATEWQRsgapppsgsa---------------------------------------------------------- 209 human
AAH56825  231 RRLAAEATEWQKagapppsgsavstapapkqapkmsknkkkklkkkqkrqaellekcimdleemeigpegreeeeddpes 310 zebrafish
AAH72199  229 RRLAAEATEWQRsgapppsgsavstapppkqstkmsknkkrklkkkqkrqaellekrvqemeemdregenqdedsteqaq 308 African clawed frog
XP_419265 320 RRLAAEATEWQRsgapppsgsavstapqpkpadkmsknkkkklkkkqkrqaellekrmqeieemekeaspgqthpeeeee 399 chicken
Feature 1                                                                                     
3BEG_A        --------------------------------------------------------------------------------     human
1WBP_A        --------------------------------------------------------------------------------     human
AAH56825  311 pkspscaplrqaslqeiatediimdtrerltsdasveln-------------------------------cngclhsskt 359 zebrafish
AAH72199  309 etwtesgsepncngltsetpldnne------------------------------------------------------- 333 African clawed frog
XP_419265 400 aqsplkmlikvsppsedadkkkgmdqkysevivreqsvlmessiekcvkeincngvirmsdfpdsgsqgsvqleddlhna 479 chicken
Feature 1                                                                                     
3BEG_A        --------------------------------------------------------------------------------     human
1WBP_A        --------------------------------------------------------------------------------     human
AAH56825  360 qpeedeqgdlqygqllqedhhnanagpedtaqsmyeycngaespeldqacysngtsgqeqledgelateeqhqqktrtra 439 zebrafish
AAH72199  334 ----slsqnnysctvtssssldspseqpsevpapvcididgqhipnavevmlsqtstvqphkhneneeisqlqesirkei 409 African clawed frog
XP_419265 480 ndcgdhphtqkenfhscnysqrngdvenrpraavsdsfvplvsedsmvcqptsseeqsfneqeishlqesirtempsede 559 chicken
Feature 1                                         #                                           
3BEG_A    194 -------vstapatagNFLVNPLEPkNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACM 266 human
1WBP_A    210 -------vstapatagNFLVNPLEPkNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACM 282 human
AAH56825  440 reqnkdkikddklsagSLLVNPLDPlNADKIKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLLGSGYNTPADIWSTACM 519 zebrafish
AAH72199  410 sseeqegssamkmtanTHLLNPLEPqNAEHLKVKIADLGNACWVQKHFTEDIQTRQYRSLEVLIGSGYSTPADIWSTACM 489 African clawed frog
XP_419265 560 nennspadnkgkstagNFLLNPLEPkNADKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYSSPADIWSTACM 639 chicken
Feature 1                                                                                     
3BEG_A    267 AFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQ 346 human
1WBP_A    283 AFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQ 362 human
AAH56825  520 AFELATGDYLFEPHSGEDYSRDEDHIALIIELLGVVPRKLVLTGKYSKEFFSKKGDLKHITKLKPWGLLDVLMDKYEWPQ 599 zebrafish
AAH72199  490 AFELATGDYLFEPHSGENYSRDEDHIALIIELLGRIPRKLIVAGKYSKEFFTKKGDLKHISKLKPWGLFEVLVEKYEWAE 569 African clawed frog
XP_419265 640 AFELATGDYLFEPHSGEDYSRDEDHIALIIELLGKIPRKLILAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQ 719 chicken
Feature 1                                      
3BEG_A    347 EEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 379 human
1WBP_A    363 EEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395 human
AAH56825  600 EEAQTFSDFLLPMLELLPEKRATAADCLRHPWL 632 zebrafish
AAH72199  570 EDAAGFTDFLLPMLELAPEKRVTASQCLNHAWL 602 African clawed frog
XP_419265 720 DEAAAFTDFLLPMLELIPEKRATAAECLRHPWL 752 chicken

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