Conserved Protein Domain Family
STKc_LRRK2

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cd14068: STKc_LRRK2 
Catalytic domain of the Serine/Threonine Kinase, Leucine-Rich Repeat Kinase 2
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. LRRK2 is one of two vertebrate LRRKs which show complementary expression in the brain. Mutations in LRRK2, found in the kinase, ROC-COR, and WD40 domains, are linked to both familial and sporadic forms of Parkinson's disease. The most prevalent mutation, G2019S located in the activation loop of the kinase domain, increases kinase activity. The R1441C/G mutations in the GTPase domain have also been reported to influence kinase activity. LRRKs are also classified as ROCO proteins because they contain a ROC (Ras of complex proteins)/GTPase domain followed by a COR (C-terminal of ROC) domain of unknown function. In addition, LRRKs contain a catalytic kinase domain and protein-protein interaction motifs including a WD40 domain, LRRs and ankyrin (ANK) repeats. LRRKs possess both GTPase and kinase activities, with the ROC domain acting as a molecular switch for the kinase domain, cycling between a GTP-bound state which drives kinase activity and a GDP-bound state which decreases the activity. The LRRK2 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270970
Aligned: 3 rows
Threshold Bit Score: 511.805
Created: 5-Jan-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:active site [active site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1      #####   #           # #                              #             ####   # #   
AAH76853    30 LLGDGGFGSVYRASYKgEDVAVKIFNKHts----sRLLRQELTVLSHLHHPSLVYLLAAGVHPRMLVMELAPkGSLDHLL 105  African clawed frog
CAG05593  1972 FPGGGGFGNVYRGVYRkEDVAVKIFNNHaselyvfRLLRQELVVLSRLRHPSLVALLAASTAARALVMELAPrGSLDALF 2051 Tetraodon nigrov...
Q5S007    1884 LLGDGSFGSVYRAAYEgEEVAVKIFNKHts----lRLLRQELVVLCHLHHPSLISLLAAGIRPRMLVMELASkGSLDRLL 1959 human
Feature 1                                        # # ## #               #  #                   
AAH76853   106 QqdsasLTRTLQHRIALHVADGLRYLHsAMIIYRDLKPHNVLLFTLypnsaIIAKIADYGIAQYCCRMGIKTS------- 178  African clawed frog
CAG05593  2052 QhenggLNRKLQHRIALQVADGLRYLHsAMIVYRDLKPHNVLLFNLktdceMIAKITDYGIAQHCCSMGVRSCegtpggl 2131 Tetraodon nigrov...
Q5S007    1960 QqdkasLTRTLQHRIALHVADGLRYLHsAMIIYRDLKPHNVLLFTLypnaaIIAKIADYGIAQYCCRMGIKTS------- 2032 human
Feature 1                                                ####                                  
AAH76853   179 -----------------------------------------EGTPGFRAPEVARGnvIYNQQADVYSFGLLLYDILTgga 217  African clawed frog
CAG05593  2132 sswawfcsrflpvqrqfvlgvqalgfrlckapggerrvvdgCASAGFRAPEVARGnvAYNQQADVFSFGLLLYDLLTcge 2211 Tetraodon nigrov...
Q5S007    2033 -----------------------------------------EGTPGFRAPEVARGnvIYNQQADVYSFGLLLYDILTtgg 2071 human
Feature 1                                                                      
AAH76853   218 RMVEGLKFPNEFDELAIHGRLPDPVKEYNCAPWPEVEVLIKKCLKEnPQQRPTsVTVYEILNSA 281  African clawed frog
CAG05593  2212 RISDGMKFPSEFDEIAVQRKLPDPVKHYGCAPWPGLQALMRDCLKEsPQCRPTsAQVFDRLNSG 2275 Tetraodon nigroviridis
Q5S007    2072 RIVEGLKFPNEFDELEIQGKLPDPVKEYGCAPWPMVEKLIKQCLKEnPQERPTsAQVFDILNSA 2135 human

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