Conserved Protein Domain Family
PK_eIF2AK_GCN2_rpt1

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cd14012: PK_eIF2AK_GCN2_rpt1 
Pseudokinase domain, repeat 1, of eukaryotic translation Initiation Factor 2-Alpha Kinase 4 or General Control Non-derepressible-2
The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. EIF2AKs phosphorylate the alpha subunit of eIF-2, resulting in the overall downregulation of protein synthesis. eIF-2 phosphorylation is induced in response to cellular stresses including virus infection, heat shock, nutrient deficiency, and the accummulation of unfolded proteins, among others. There are four distinct kinases that phosphorylate eIF-2 and control protein synthesis under different stress conditions: GCN2, protein kinase regulated by RNA (PKR), heme-regulated inhibitor kinase (HRI), and PKR-like endoplasmic reticulum kinase (PERK). GCN2 is activated by amino acid or serum starvation and UV irradiation. It induces GCN4, a transcriptional activator of amino acid biosynthetic genes, leading to increased production of amino acids under amino acid-deficient conditions. In serum-starved cells, GCN2 activation induces translation of the stress-responsive transcription factor ATF4, while under UV stress, GCN2 triggers transcriptional rescue via NF-kappaB signaling. GCN2 contains an N-terminal RWD, a degenerate kinase-like (repeat 1), the catalytic kinase (repeat 2), a histidyl-tRNA synthetase (HisRS)-like, and a C-terminal ribosome-binding and dimerization (RB/DD) domains. The degenerate pseudokinase domain of GCN2 may function as a regulatory domain. The GCN2 subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270914
Aligned: 20 rows
Threshold Bit Score: 171.003
Created: 2-Mar-2007
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9P2K8        299 ALETATGGFVLLYEWvlqwqkkmg---------pfltsqekeKIDKCKKQIQg-----------tETEFNSLVKLs-HPN 357  human
XP_761192     305 PSHSWLIEHYLITSQh-------------------------yAYSSGKRKLEe-----------vEFEFDKLVKVr-EPG 347  Ustilago mayd...
XP_811165     236 PIEDPSTDITPVYMAis-----------------------atGTLAVLKVCQltdaaarltraevDAALEELMGLrvNDS 292  Trypanosoma c...
BAE61949      277 LKSAQGKNTYAVRPVvtenrchaplli----lkeysidetqlSPLAFREKMRs-----------sEDKLEALKRLr-HPN 340  Aspergillus o...
XP_961553     280 FREGPITTVYKVKPVlsartvrpsla-----lkqvevkshgkDSAQFKKQLQy-----------lESQMETLKKLr-HQN 342  Neurospora cr...
CAJ08371     1063 SAGALCSVNYLIYREvhpvvakvirnappgpmsdalrsatpvCAPSSRQAAAv------------RRLIEKHQQLs-HPN 1129 Leishmania ma...
XP_002555319  272 SSDIMDNFFYLLTIVtldn--------------------pyfNTNNGKKDISn-----------lEKELDSLLHVr-HDN 319  Lachancea the...
EJT77293      277 FRSGAISNIYLVRPVlavglarpnla-----lkqaelksggkDAAQFKKQLQl-----------lESQLEQAKKNr-HSN 339  Gaeumannomyce...
XP_002147967  276 QSSQNSETFTARPYIsgnrtraplvv-----lkemyledkgsDSLAFRQQIRt-----------sEDKLEALKKLr-HAN 338  Penicillium m...
XP_003235032  268 IGKSHYKETFLVRPIvpgnislvpllv----lkeifiqesehKDIDLRFQISv-----------sEDKLEFLKKLr-HPN 331  Trichophyton ...
Q9P2K8        358 VVRYLAMNlkeqd---------dsivVDILVEHIsGVSLAAHLshs-gpiPVHQLRRYTAQLLSGLDYLHsNSVVHKVLS 427  human
XP_761192     348 LINVLASAvtritd-------pqgwkLSVVTERTdGFCLRDLLeqc-dslPWKRVRHYLLALLKTLDSLHtRNLVHRGVD 419  Ustilago mayd...
XP_811165     293 LVQYLSYCyvp------------phrVVLVMQYVpGGTLREMKsrygrklPLTAVRRNVASMLRGLAHLHgRGVIHGRLC 360  Trypanosoma c...
BAE61949      341 LLDFVGFKiyrplepa--spqdnawrVYLLLEHAnKGSLSEFLdiv-gsvPVETLRSWTIQLLEALEFYHrSGFVHGDIH 417  Aspergillus o...
XP_961553     343 LLPFLDFRidrgisdtd-ssaptiwtVSILTPLAtKGPIEELLdla-ghiDTNKAKIWTADLLEALAFLHnNGIIHQDLH 420  Neurospora cr...
CAJ08371     1130 LLSFLGFSesl------------eggVMPLWEFSpGGTLRELIfry-pnvKPVTINRFGLQILTALSYLHeRGVAHGSVR 1196 Leishmania ma...
XP_002555319  320 INRLYAFAvertgrs----nssyawkIRILNEYSpLSLVGDVVdsv-gyvNIATARGWVLRLIEGLESLHkQGVVHKSVN 394  Lachancea the...
EJT77293      340 LLDVMEFRmerrgdgsvdgasssdwlVSILMPFAeRGSLQDLLeia-gdiSIDKVRSWTRDLLEGLNFLHtNGIVHKSIH 418  Gaeumannomyce...
XP_002147967  339 LVELIGFKifrpiqtp--dssnsgwqICVLFEYAnKGSLSELLdmi-gsvAVDSIRSWMIQLLEALDFYHrNGVVHGDIH 415  Penicillium m...
XP_003235032  332 LVDFIGFKiqrpidss--stqtgtwhIYALFEHAnKGSLSELLdiv-gsvPADNARAWMIQLVEALEYYNrHGVVHGNIH 408  Trichophyton ...
Q9P2K8        428 ASNVLVDa---------------eGTVKITDYSISKrladic--------kedvfeQTRVRFSDNALPYkt--gKKGDVW 482  human
XP_761192     420 ADSIFIEsrtqsaipsvlrlagacYARRLKDMHKSNplndlig------piqdpvqPDAWKSPESIDQPls-ysRKRDIW 492  Ustilago mayd...
XP_811165     361 PENVMVGv---------------eGRWRLKGMLLGAapli-------------lhqETYYVSPEVAAGGak--tAANDVY 410  Trypanosoma c...
BAE61949      418 CGRIMILrnq-----------tggTIVKLQASIENAlpdsadsr-----qsleaskSPLWLPPESTQGNts-ptMKTDVW 480  Aspergillus o...
XP_961553     421 PANILLYrne-----------agdIVPKITDSFYQRelhnlctkik-tltsskaakSAYWFPPEIAGVTkpqytQKTDVW 488  Neurospora cr...
CAJ08371     1197 LDNVLVSa---------------dGKCRLTGHSGDNeaare----------lfymhQTCFISPLMATGAlp--tPQCDMF 1249 Leishmania ma...
XP_002555319  395 LQTVTLAkdad----------fgtTIPKLLHSGYGYtilnlisahpsktgpkiemiEQPWVAPELIRFNnskpqRKTDVW 464  Lachancea the...
EJT77293      419 PGNVLLFrda-----------tgsITPKLADAGFQReirdiclstr-avpsmreakSAYWFAPEVANTAkphytQKTDIW 486  Gaeumannomyce...
XP_002147967  416 SGRVMLFrha-----------sgsTTVKLQGNVEATlpqcnnrq-----ealatsrSPFWLPPELAQNDar-stTKTDIW 478  Penicillium m...
XP_003235032  409 CGRVLLFrsp-----------sstTTVKLLGNVEEVyplsstar----rrslttpkSPFWLPPELAGEGmk-ptIKTDVW 472  Trichophyton ...
Q9P2K8        483 RLGLLLLSLsqgqecgey-------------------------------------------pvtipsdlpADFQDFLKKC 519  human
XP_761192     493 DLGVCACQMlfglecfhehdl-------------------------------------pehlirgskvlaPHVQAFLLLM 535  Ustilago mayd...
XP_811165     411 ALGLLLLAMltdshpwqwsanaaldrsrneldsll----------adstafrealrnglltpvptpadtdETLRTVLEAC 480  Trypanosoma c...
BAE61949      481 DLGIVFLQMgfgkdvlqryts--------------------------------------analmgtlglsAPLQDLLNEF 522  Aspergillus o...
XP_961553     489 DFGIVFLQMifgldvvekyhs--------------------------------------psalmdslslsAPLEELVSKF 530  Neurospora cr...
CAJ08371     1250 CIGLGALEAltkqpawkwatgndgqplgtaaelselmkaggttfssaltqgrvvvnvdplrgasvvgkysNRAVESLIRC 1329 Leishmania ma...
XP_002555319  465 ELGVLFVQTingadtvvkfpt--------------------------------------pqeflsnvpmdESLFDFLQKL 506  Lachancea the...
EJT77293      487 DFGVMFLQTvfgldvpqryes--------------------------------------pndlkaslslsPELDELVSSF 528  Gaeumannomyce...
XP_002147967  479 DLGIVLLQMgfgkdvlqkyts--------------------------------------anavmnsldlsMSLHDLLREI 520  Penicillium m...
XP_003235032  473 DLGILFLQMgfgkdilqryts--------------------------------------adavinsmelsPQLEDMLAEI 514  Trichophyton ...
Q9P2K8        520 VClDDKERWSp-------qQLLKHSF 538  human
XP_761192     536 LErASKKRPTaasl-vsrlDELILYE 560  Ustilago maydis 521
XP_811165     481 LRtAPGDRPTa-------aDILFLCN 499  Trypanosoma cruzi strain CL Brener
BAE61949      523 FRtDPKKRPTa-------fQLQPSEF 541  Aspergillus oryzae
XP_961553     531 FKsDPKKRPRa-------fELSSSEF 549  Neurospora crassa OR74A
CAJ08371     1330 LSlDPAERPTamqvreaskEMLLLAG 1355 Leishmania major strain Friedlin
XP_002555319  507 LEpDLKKRFGp-------lELLPMKF 525  Lachancea thermotolerans CBS 6340
EJT77293      529 FSaESAKRKRa-------fDLSSSHF 547  Gaeumannomyces graminis var. tritici R3-111a-1
XP_002147967  521 FKpDPKKRPTa-------fQLQPSEF 539  Penicillium marneffei ATCC 18224
XP_003235032  515 FRsDPKKRPTp-------fQIQPFEF 533  Trichophyton rubrum CBS 118892
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