3QA8,3RZF


Conserved Protein Domain Family
STKc_IKK

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cd13989: STKc_IKK 
Click on image for an interactive view with Cn3D
Catalytic domain of the Serine/Threonine kinase, Inhibitor of Nuclear Factor-KappaB Kinase (IKK)
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The IKK complex functions as a master regulator of Nuclear Factor-KappaB (NF-kB) proteins, a family of transcription factors which are critical in many cellular functions including inflammatory responses, immune development, cell survival, and cell proliferation, among others. It is composed of two kinases, IKKalpha and IKKbeta, and the regulatory subunit IKKgamma or NEMO (NF-kB Essential MOdulator). IKKs facilitate the release of NF-kB dimers from an inactive state, allowing them to migrate to the nucleus where they regulate gene transcription. There are two IKK pathways that regulate NF-kB signaling, called the classical (involving IKKbeta and NEMO) and non-canonical (involving IKKalpha) pathways. The classical pathway regulates the majority of genes activated by NF-kB. The IKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K).
Statistics
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PSSM-Id: 270891
Aligned: 7 rows
Threshold Bit Score: 512.379
Created: 11-Sep-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #####   #            # #                                   #                    
3QA8_A        22 LGTGGFGYVLRWIHqdtgEQVAIKQCRQELsp-----kNRERWCLEIQIMKKLn-HPNVVSAREVPDGLqkl-----apN 90  African clawed ...
3RZF_A        23 LGTGGFGYVLRWIHqdtgEQVAIKQCRQELsp-----kNRERWCLEIQIMKKLn-HPNVVSAREVPDGLqkl-----apN 91  African clawed ...
AAX56336      15 LGSGGFGQVVLWKHedndQYIAIKTCRVQNemt---ekHKQRWKLEVDIMKRLd-HTNVIAARDVPPPLev------teN 84  Pinctada fucata
XP_969880     68 LGSGAFGVVALWQHagsgDYIAIKKCKFRTsghl-sdrQKQRWENEVQIMKTLn-CPNIVSFKLLPPHLeavll-kynpT 144 red flour beetle
EAT45468      20 LGSGGFGFVTLWKNhktnEMVAIKKCHILLdksemtdkNCERWCNEVSLMMNKvrNENIVRTVRVQPETflqelikhstN 99  yellow fever mo...
XP_002604730  29 LGSGGFGTVTLWRHkessETVALKKTRQELnp-----kNRERWKLEVDIMKRLk-HDHVVTAMDVPDPLkp------siD 96  Florida lancelet
O15111        21 LGTGGFGNVCLYQHreldLKIAIKSCRLELst-----kNRERWCHEIQIMKKLn-HANVVKACDVPEELni------liH 88  human
Feature 1              ####   #                                         # # ## #                #
3QA8_A        91 DLPLLAMEYCegGDLRKYLNQFencCGLKEGPIRTLLSDISSALRYLHeNRIIHRDLKPENIVLQPgp---qRLIHKIID 167 African clawed ...
3RZF_A        92 DLPLLAMEYCegGDLRKYLNQFencCGLKEGPIRTLLSDISSALRYLHeNRIIHRDLKPENIVLQPgp---qRLIHKIID 168 African clawed ...
AAX56336      85 ELPLLAMEYCsgGDLRKVLNLPesaCGLKEYEIRNLVKDISSAIEYLHgKRIIHRDLKPENVVLTQse--dnKTVYKLID 162 Pinctada fucata
XP_969880    145 RLPLLSMEYCrkGNLRHVLNQAknsSGLGESDVRTVLADVTQAVSYLHkQNITHRDIKPENIVLQHcntrpgDVIYKLID 224 red flour beetle
EAT45468     100 KLPILCMEYCegGDLRRVLNRVsscSGLKELEVREILRSLRNAISYLHnLRITHRDIKPENIVLKQmg---dRMVYKLTD 176 yellow fever mo...
XP_002604730  97 HLPFLAMEFCsgGDLRKVLSRPenyCGMKEIDVRNVVRHVASGVEYLHsKRIIHRDLKPENIVLQEee--ggEVVYKLID 174 Florida lancelet
O15111        89 DVPLLAMEYCsgGDLRKLLNKPencCGLKESQILSLLSDIGSGIRYLHeNKIIHRDLKPENIVLQDvg---gKIIHKIID 165 human
Feature 1                                                                                        
3QA8_A       168 LGYAKELDQgeLCTEFVGTLQYLAPELLEqkkytVTVDYWSFGTLAFECitGFRPFLPNwQPVQWHGKVREKsn-ehIVV 246 African clawed ...
3RZF_A       169 LGYAKELDQgeLCTEFVGTLQYLAPELLEqkkytVTVDYWSFGTLAFECitGFRPFLPNwQPVQWHGKVREKsn-ehIVV 247 African clawed ...
AAX56336     163 LGYAKELDQssVCTSFVGTLQYLAPELFAsqkytCTVDYWSFGTVVFECitGYRPFLPQvPPVTWHREVCQKsp-edICA 241 Pinctada fucata
XP_969880    225 LGYAKELSD--SVVSFVGTLHYLAPEIMKtenydFSVDYWSLGVVAFEVicGVLPFLPLyTPMERFSFIERKkp-ehICI 301 red flour beetle
EAT45468     177 LGYAKALDKqsLNASLVGTVEYIAPDLIYcdrynCSVDYWSMGIIAFEIicGIRPFSPHsIVAKWMMLVQQKks-shIAI 255 yellow fever mo...
XP_002604730 175 LGYAKDLDQgsVCSSFVGTLQYLAPELFAsqrytRTVDYWSFGTLVFECitGSRPFLPNrNPVQWHLEVKRRkqdthIRA 254 Florida lancelet
O15111       166 LGYAKDVDQgsLCTSFVGTLQYLAPELFEnkpytATVDYWSFGTMVFECiaGYRPFLHHlQPFTWHEKIKKKdp-kcIFA 244 human
Feature 1                                                                         
3QA8_A       247 YDDLTGAVKFSSVLPTPNHLsgilaGKLERWLQCMLMWhQRQRGTdpqn--pnvgCFQALDSILS 309 African clawed frog
3RZF_A       248 YDDLTGAVKFSSVLPTPNHLsgilaGKLERWLQCMLMWhQRQRGTdpqn--pnvgCFQALDSILS 310 African clawed frog
AAX56336     242 YYDSDGVVKFSKKITSPTHLcrsmqAYFEQWLRIMLRWdPRQRGGglged-rkpqCFKFLDTMLD 305 Pinctada fucata
XP_969880    302 YQLHSGSVMYSSELLKENHIstclkQNIESWLRHVLQFdPTQRRAnfpd---nsnVFDCLLNILD 363 red flour beetle
EAT45468     256 TEDNRENYTYHSELFSENHIssvlkTYLEKWLTLALEWnPKQRGH----------VFQIGDKEVT 310 yellow fever mosquito
XP_002604730 255 YEERTGEIKLASDIPAPHHLcqplvERFESWLQLMLRWePQGRGGggnn---ratCFELLDSILD 316 Florida lancelet
O15111       245 CEEMSGEVRFSSHLPQPNSLcslivEPMENWLQLMLNWdPQQRGGpvdltlkqprCFVLMDHILN 309 human

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