Conserved Protein Domain Family
PT_UbiA_3

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cd13965: PT_UbiA_3 
UbiA family of prenyltransferases (PTases), Unknown subgroup
Many characterized members of the UbiA prenyltransferase family are aromatic prenyltransferases and play an important role in the biosynthesis of heme, chlorophyll, vitamin E, and vitamin K. They contain two copies of a motif similar to the active site DxxD motif of trans-prenyltransferases and are potentially related. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways. The function of this subgroup is unknown.
Statistics
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PSSM-Id: 260128
Aligned: 69 rows
Threshold Bit Score: 160.118
Created: 26-Feb-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative active
Feature 1: putative active site [active site], 8 residue positions
Conserved feature residue pattern:N Q x D Q [eD] D DClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on homology modeling using structures of trans prenyltransferases that are helical enzymes containing two D-rich motifs in the active site

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                    ##  #   #           
EDP53858      42 TWRLLYANAGeglVLPVVGMLARFLPtpslldstpwlqllsvLLKTVFLFICHLYVFeiVNQVTSVEEDrINKPQRPIPS 121 Aspergillus fum...
ACU60641      24 AWKFIDNDIWd-tILPSLMIFFTGWIyhgrsw----aelplpFLTSLSYAVLYIYTFcmGNQLDGVEEDrLNKPYRPLVT 98  Chitinophaga pi...
ZP_11210568   23 SWLFIRSDRWt-tLFPATCFVLAAAVhtrlpp----aetavaVASGVLYFWLFVYEHtlANQLVGLEEDrVNKPLRPLVS 97  Streptomyces so...
YP_007088493  33 NWLFIKSEIWv-gVVPGLIFLCVAWNsqespt----gellpvLAWGTLYFFLCTYTFcvANQMMGVVGDrINQRDRPLCR 107 Oscillatoria sp...
ABY34076      26 YWKFNRYDISa-tVMPGMLFVLAAWHsqnpdw----aalpglIIWGTIYFWLYCTTFciSNQLAGEVEDrLNKPDRPLPS 100 Chloroflexus au...
AGB81855      20 SWRFVKNNIWa-gAVAPTLFTLALCAakglag----teiaasTLASFFYAYLHLYVFdiNSQIFGIEEDkINKPDRPLAA 94  Serratia marces...
EEA22032      30 CYGFVRRDLGt-gLLPVPGFTLASLLyrkasa----eeiysvIPYAFLYGFLYLYSFvvANQIDGVNEDkVNKPDRPIAS 104 Penicillium mar...
EEA21176      19 CYGFIRRDVSm-gMLPIPVFTTASLLyrnapl----heitiaIAKTLLLGLLYLYSFvvGNQICGVEEDqINKPDRPIAA 93  Penicillium mar...
ACU73828      34 TARLTVDNAIa-aFTPGLLFTTAACVhykvtg----telatrLALSCVMFALYLYVFdaSNQYRAGAEDlLNKPYRPIPA 108 Catenulispora a...
ADG97015      13 TLRLNINNIWv-aMFPAVVFAAAGWVsngsss----atealkFLAALVWSYFFSYVFdaANQAVGCEEDvLNKPHRPIPH 87  Segniliparus ro...
Feature 1                                                                                        
EDP53858     122 GLLTVa-gGRKRWAVSwIVCPLLAyYLAGFQAGCLFleyqlWTCFCYVWPKINhf--mFRNAFASVGVYNMFRLIDVIIs 198 Aspergillus fum...
ACU60641      99 GLVTVr-eTYRRFWIYnILYALYGlLLGTFWYAIAWi----IVSCYLNLGGGSnhwatKNLVGMTLGTFILFNVQWSIAl 173 Chitinophaga pi...
ZP_11210568   98 GRSSVr-gARLRLIAVrVAFPLYGwFLGVLEWALLWq----VLSLLQHEGGWGrh-wlGRNLYAGIGVVAQLAAAWEIVa 171 Streptomyces so...
YP_007088493 108 GLISYq-gAKRRWIASlVGFSVVGwQLGVFEWTLLWq----LCIIALTLGRLGve-wpTKHFFLGLGAIAQMAAAWQIVe 181 Oscillatoria sp...
ABY34076     101 GLVSRr-gAFVRWIIAmVLFAAVGwWLGVLEWTLLWq----VTLTLHNFGQFArh-ywFKNLSMVFGAIAQLAAAWQMVr 174 Chloroflexus au...
AGB81855      95 KIITLa-sAKVRAIIFtLLFFAYGiCLGVIGWTLLWv----LFVLLYSYTPWSnn-wlLKNLFVALGILTLLPVAAHNAg 168 Serratia marces...
EEA22032     105 GATTLr-aAKIRWTILtLLYLGYSfYLGVEKPTLLWi----ATTIAHNFLGFAnf-gpTKDGCMGAGCIAQLTAGWAIGg 178 Penicillium mar...
EEA21176      94 GATTLk-aARIRWAVLtMLYFSYGcYLGVGVWSAMWi----AISVAHNFLSFGdf-gpTKDMCIGLGCVAQLTAAWLIGg 167 Penicillium mar...
ACU73828     109 GLTTPr-gLLRRFWVTmALYTALGmVTGTLPWVLLWq----GTAIGLNLISTPrhylyVKPLAMIAGILSQLAMAWTLAg 183 Catenulispora a...
ADG97015      88 GLVDSrglWARYRWAS-ALFVAVS-LVGNATTLAASlgwvlVTLFAHTQLKPRhy-ylWKPVTTWLGVVAQLAGGWSFMd 164 Segniliparus ro...
Feature 1                                     ##  #   #                                          
EDP53858     199 sev-psfPLPPIDFYLVLs-AWVMLTVHMQEFHDREGDKktNRQTLPVIVGPRWHGalrwat-allvmGTGIMPLCITGK 275 Aspergillus fum...
ACU60641     174 padahigTNLEVYFALMS--AWAGFALPIQDLRDMAGDLkgGRRTLPIVVGDTRARwyl------cihYLIFLPATFLCA 245 Chitinophaga pi...
ZP_11210568  172 ------pVTPDAWRWIVTltITVTLLMSVQDLRDITGDRavGRSTMPLVFGERNTRvflcagfalgplAIHHFLMAPAGP 245 Streptomyces so...
YP_007088493 182 ------pINLVKWTWILLvaILCSAVVGIQDLSDREGDVatGVNTFPVTFGNVGSRv-----------ILCIGFLLLPLA 244 Oscillatoria sp...
ABY34076     175 ------pLTPEAWSWLLVpaITLLSHASLQDLRDMEGDRmnRRRTLPIVFGEWPSRv----------fIAIAFALLAVLT 238 Chloroflexus au...
AGB81855     169 ------vPLREIAHWLLSllVMTSYMITTQDLRDVKGDAhiGRKTFPLVYGMRTAKi----------aLSLAYLLSLVIA 232 Serratia marces...
EEA22032     179 ------sSPEMGWDWIKYitLYMLWPIPLQDLRDVPGDKavGRLTTPILMGDTISRiy---------iSAGICVSQYLLV 243 Penicillium mar...
EEA21176     168 ------aPYEVGWNWIKIiaLYTLFPIPLQDLRDVPGDLavGRRTTPILMGDMPCRiy---------iSLGVFISQFLLI 232 Penicillium mar...
ACU73828     184 ------pIDHTGWTWILIltIAFNLPMRIEDVRDMDGDQrvGRTTLPLIIGHWPVRi----------wFVAVSLVLPLAI 247 Catenulispora a...
ADG97015     165 ------dLASESIMWIVVvaTMFIVAQPIEDVRDIAGDTrmGKVSLAYLFGAKKVCv----------aFCLIIAAWPFLA 228 Segniliparus ro...
Feature 1                                                                                        
EDP53858     276 LVWNgqdtgfrnkrwiytgtvitAILHVVFAs--------LSGLRCAFSWGEAaydrqtykrfymlaayTMVCYLSFAYL 347 Aspergillus fum...
ACU60641     246 MLTQdslh-----------difsVAVDLIIFliql-vvhwTVAVRLLLFRSPSad------------hkTYHCYVLLFVA 301 Chitinophaga pi...
ZP_11210568  246 HWWI-------------------VATDVVLGgl-----slLLAFRVVLRRGQRsdqht------yrlveQWYTLALAASL 295 Streptomyces so...
YP_007088493 245 IHVGllmpa----------gfnnHLLPWAIAqal---vswGVAVRVILYQSPTadrdt-------yllaLAWYYIILGSA 304 Oscillatoria sp...
ABY34076     239 HAALfvpngln------agtlllDGLLAGMCl--------VIAGRVLLLRNPAad------------hvSYMLYTLLVLS 292 Chloroflexus au...
AGB81855     233 HYTLftpgengssgarllfesgsAVILLCIAarlc-kqdaDCHYDHFTYRLWEy--------------wYTLVCISIFAF 297 Serratia marces...
EEA22032     244 RYRIleyryd-------istiilSALLAVMSl--------AVVVRLFAWRTVTadry--------sywlYTVIYVFQPIS 300 Penicillium mar...
EEA21176     233 KYRIldyrv----------dwstVALSTILGfl-----alTVIFRLFAFRDVKsdry--------syrlYTVIYLFQPLS 289 Penicillium mar...
ACU73828     248 HILLfap-------------trhTASSTAICdalvivtswSAAALTLYPRTPRtdria------yqvhcIAYCAVLACAI 308 Catenulispora a...
ADG97015     229 YALFlhsst---------lspweWGALLLLGal------cGIAFHHAYQWNSLhhqr---------rayIVYCFAYIALT 284 Segniliparus ro...
Feature 1         
EDP53858     348 T 348 Aspergillus fumigatus A1163
ACU60641     302 S 302 Chitinophaga pinensis DSM 2588
ZP_11210568  296 Y 296 Streptomyces somaliensis DSM 40738
YP_007088493 305 S 305 Oscillatoria sp. PCC 6304
ABY34076     293 G 293 Chloroflexus aurantiacus J-10-fl
AGB81855     298 Y 298 Serratia marcescens FGI94
EEA22032     301 A 301 Penicillium marneffei ATCC 18224
EEA21176     290 A 290 Penicillium marneffei ATCC 18224
ACU73828     309 A 309 Catenulispora acidiphila DSM 44928
ADG97015     285 L 285 Segniliparus rotundus DSM 44985

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