Conserved Protein Domain Family
PANDER_like_TMEM2

?
cd13938: PANDER_like_TMEM2 
PANDER-like domain of the transmembrane protein TMEM2
TMEM2 has been characterized as a transmembrane protein that maps to the DFNB7-DFNB11 deafness locus on human chromosome 9. It contains a domain similar to the Pancreatic-derived factor PANDER, C-terminal to a glycine rich G8-domain. The function of the PANDER-like domain in TMEM2 has not been characterized.
Statistics
?
PSSM-Id: 260112
Aligned: 16 rows
Threshold Bit Score: 232.6
Created: 14-Feb-2013
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q9UHN6        220 KFIGVEAGGTLELHGARKASWTLLARTlNSSGLPFg-SYTFEKd----fSRGLNVRVIDQDTAKILESERFDTHEYRNES 294  human
NP_001092919  222 KFLGVNSGGTLELHGSERMSWTFLTRTvPASGLATg-DHAFQKn----fSRGINLRVVDQDTAEVLVNERFDTHESQDDS 296  zebrafish
XP_002587090  115 KQFLVMAGGTVEIHGQHKLAWTQLTQTvPAGGLPKgaFAWDSAssgsgrGRGIHVNVVDEISGVVVGWQSFDTHDSEDNS 194  Florida lancelet
XP_002594510  131 KQFLVMTGGTLEIHGKQKLAWTQLAQTvPAGGLPRgtYYYDSTnr---wTRGINVRAIDETSGAVVDLADFDTYESEEES 207  Florida lancelet
XP_002594736  102 KQFLVTSGGTLEIHGQHKVAWTQLTQTvPQGGLPKgaYSWDSAvd--gwQRGINVRVIDEISAAVVDSANFDTWSSEDHS 179  Florida lancelet
XP_002607300  209 KQFLVLEGGTLEVHGKHKLGWTQLSQTvPAGGLPKgtYVWDSApa---rPRGIHVRVFDEISGTHLSTDRFDTQVNEAES 285  Florida lancelet
XP_002607372  131 KFFGVNKDGVVEIHGKPKLSWTQLTATvMSEGLPKggHHSGVG------HRGINLRVLDELTGEVVENSWYDTYINMEDS 204  Florida lancelet
XP_002932301  260 KFLGVDTGGILELHGRKPLSWTLLDAT-LHPGGLPhgPYKWEKqw---gSRGINIRIIDPETGQVIAADRFDTHMFLDEG 335  western clawe...
XP_003452697  224 KFIGVKAGGTLEVHGTERVSWSLLTRSiPASGVATg-GYAFQRn----fSRGIHLRVVDQDTAALLFSERYDTYDSRNDS 298  Nile tilapia
XP_413852      83 KFLGVGSGGVLELHGRRPRSWSLLDKT-LHPGGLRhgPYSSERrw---gSRGLNLRVLDAGTGRVAAAGRFDTHLRAAEC 158  chicken
Q9UHN6        295 RRLQEFLRFQDPGRIVAIAVGDSAAKSLLQGTIQMIQERLgSELIQGLGyRQAWALVGVIDGGStsCNESVRNYENhss- 373  human
NP_001092919  297 KRLGELLKALPAGRIVALATGDSAVKNLVFETKQTIHDLLgSNYISDLKyRDAWALVSVIGGGNgsCTEDVREHENhdt- 375  zebrafish
XP_002587090  195 RSLATFIDQIPSGKIVTLQAQDDASANLEATAREKIRALG-SVEVDFLShREPWAFVGVKGDPSr-AVEQRIPYVGeyl- 271  Florida lancelet
XP_002594510  208 RRLANFIDRIPPGRIVALAANDEASKNLEESAKSKIRELG-SVEVDSLGhRDPWAFVGVKGNQSs-AVEQRIPYVDtnm- 284  Florida lancelet
XP_002594736  180 RSLATFLDQIPAGRIVALAVMDEAVGNLEDSAKEKLRELG-TRRTKYFF-REPWTLVAIKGDPGa-AVEQRIPYTDsqs- 255  Florida lancelet
XP_002607300  286 LRLAAFIDQVPAGKVVALAVVTTANGKLEATAKQKIRELG-SVEVETLGrRQPWAMVSVKGDPSv-AVEQRLPFLDdqt- 362  Florida lancelet
XP_002607372  205 KKLSAALNGVADGRIIIMAVRDEGSKSLGTAAKKAIRSLG-SKEIDKLSyREPWVFLGVKGNTSa-AVEKRLSYKGksdf 282  Florida lancelet
XP_002932301  336 KRLEEFLAQQSPGKIVAAAVGDSAAKSLTPDTRKFLRDALsSKYIFHLGyRQPWALVGVLGEDLlmVAEDRKQYESngt- 414  western clawe...
XP_003452697  299 QRLAQLLRSLPVGRIVTLAVGDSADRNLEQGTREVINEKLgSRFVWHLQyRQAWALVSVIGGGNasCSEDVREHENhdt- 377  Nile tilapia
XP_413852     159 HRLRDFLALQPEGSVVAAAVGDSAARSLTLETRLLLRDRLrSRHISRLGyRQPWALVGILGGDPflTAEDKREYHGngt- 237  chicken
Q9UHN6        374 --ggKALAQREFYTVD 387  human
NP_001092919  376 --ggKALARQDFFTVD 389  zebrafish
XP_002587090  272 -ttgTAAVTATFDAFF 286  Florida lancelet
XP_002594510  285 --tgTATASARFHSVF 298  Florida lancelet
XP_002594736  256 --tgTATVTVSFNGFF 269  Florida lancelet
XP_002607300  363 --tgTATAAVTLQSFF 376  Florida lancelet
XP_002607372  283 hisvTGKVADYVISLN 298  Florida lancelet
XP_002932301  415 --tgLATATREFQTYS 428  western clawed frog
XP_003452697  378 --ggRALARRNFTTVN 391  Nile tilapia
XP_413852     238 --tgLAVAQREFLTYD 251  chicken
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap