3GYR


Conserved Protein Domain Family
CuRO_3_PHS

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cd13892: CuRO_3_PHS 
Click on image for an interactive view with Cn3D
The third Cupredoxin domain of phenoxazinone synthase (PHS)
Phenoxazinone synthase (PHS, 2-aminophenol:oxygen oxidoreductase) catalyzes the oxidative coupling of substituted o-aminophenols to produce phenoxazinones. PHS has been shown to participate in diverse biological functions such as spore pigmentation and biosynthesis of the antibiotic grixazone. PHS is a member of the laccase-like multicopper oxidase (MCO) family, which are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.
Statistics
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PSSM-Id: 259959
Aligned: 7 rows
Threshold Bit Score: 229.339
Created: 5-Feb-2013
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: Type 1 (T1) Cu binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H C H XClick to see conserved feature residue pattern help
Evidence:
  • Structure:3GYR; Streptomyces antibioticus Phenoxazinone Synthase binds to copper at T1 copper center; contacts at 3.5A.
  • Comment:Type 1 (T1) copper sites are characterized by their conserved H...C...H...M copper ligands.
  • Comment:Some members bind copper at the T1 site with three amino acid residues (HCH), instead of four (HCHM).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
3GYR_A       408 HGHRLIVLTPpgt---------kgsGGHPEIWEMAEvedpadvqvpaegviqv--tgadgrtktyrrtartFNDGLGFTI 476  Streptomyces a...
XP_001748107 613 PDKYLNANLKklkak------skykRRDFILSEEKDdscggkv----------------------frinngSWDDVDVKV 664  Monosiga brevi...
YP_006981336 467 PDPDHDVVTPeqkvwlvvappgtegNGHPQLWEMEDvsdlppdqvgandvirl-sggkgnkpmvlraaaklFDDTVNVMI 545  Propionibacter...
YP_001821963 451 APERLVIVTPv-------------yPKDPELWEMEEteapegslpvdgivqi---qdergtvrtfrrvsatFEDPVRFTV 514  Streptomyces g...
YP_006249149 445 AVERFVLLSLd-------------pMGTPTVMELQEaagtktgegvvqia-------lpggtrtfriigkhFEDAANFYA 504  Streptomyces h...
EHN77704     448 HGERPRWVVLvgp----------gtADVPELWEMEEvepaeaggitlpspgivqvedaagtvttlrrtalrYDDGNAFTA 517  Streptomyces c...
EGD78787     664 PPKALDTSVKqlpss------anmvKREFTMGEMQEekcsgkv----------------------yringlGWDDLTEFP 715  Salpingoeca sp...
Feature 1                             #                                                          
3GYR_A       477 GEGTHEQWTFLNLS----PILHPMHIHLADFQVLGRDAYdasgfdlalggtrt------pvrldpdtpvplaPNELGHKD 546  Streptomyces a...
XP_001748107 665 KAGKKEIWTFVNINe---GHIHPMHLHLAEFQIDERQPIvyfpgnqtyv--------------ktgyatkpeHYERGWKD 727  Monosiga brevi...
YP_006981336 546 ADGAWVRWNVVHLG----GPAHPMHIHMTSFQMIERLAWkldqntgnvpgfdpatgstpsplpvpgagpaidPVTGGTKD 621  Propionibacter...
YP_001821963 515 ARGATERWRFLSLEksagAYPHPMHLHSVAFQGLSREVYdvssftffelpgggyg-agtttpirwrenapltAAEQGPKD 593  Streptomyces g...
YP_006249149 505 AAGSWEKWTFISVGpvtqHIQHPMHIHLMNFQVLERHTVdgtafdtalggtt--------rpitlkdsvpiaTSESGWKD 576  Streptomyces h...
EHN77704     518 AHGGVEVWKYLNLA----ASPHPMHIHLAHFRVLSRENYdvtgfdrtvrgta--------rpathmgaaqlePHELGDKD 585  Streptomyces c...
EGD78787     716 LVGSREEWTFVNLDs---THLHPMHMHLVEFTVLRRQPIqvtgdgtye---------------lvgepsgplKGDLGWKD 777  Salpingoeca sp...
Feature 1                                               #    #    #          
3GYR_A       547 VFQVPG------------PQGLRVMGKFDg-aYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593  Streptomyces antibioticus
XP_001748107 728 VVHVGP------------MESVTVVVQFDkkhLGRFPYHCHVLEHEDHDMMRQVCTSMFK 775  Monosiga brevicollis MX1
YP_006981336 622 TWVVQP------------GEVVSVLGRFGg-aTGEFMYHCHILDHEDHTMMRPFVVLPRD 668  Propionibacterium acidipropionici ...
YP_001821963 594 VISLAP------------AQLITVGATFDg-pPGRFMHHCHVYEHEDMMMMRPFVVQPKA 640  Streptomyces griseus subsp. griseu...
YP_006249149 577 TVNLMA------------NSMVTIAGQFGt-eTGRFMYHCHILDHEDEGMMRPLIVMPPQ 623  Streptomyces hygroscopicus subsp. ...
EHN77704     586 TIRVGTagqivpgpngtpGELVTVLVRFPv--VGRGVHHCHMLEHEQHMVRPLVVSPAAH 643  Streptomyces coelicoflavus ZG0656
EGD78787     778 MVGVFP------------LEAVTVIVQFPdkgGGRFPYHCHILEHEDHDMMRQFHLQQLH 825  Salpingoeca sp. ATCC50818

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