1GSK


Conserved Protein Domain Family
CuRO_3_CotA_like

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cd13891: CuRO_3_CotA_like 
Click on image for an interactive view with Cn3D
The third Cupredoxin domain of bacterial laccases including CotA, a bacterial endospore coat component
CotA protein is an abundant component of the outer coat layer in bacterial endospore coat and is required for spore resistance against hydrogen peroxide and UV light. CotA belongs to the laccase-like multicopper oxidase (MCO) family, which are able to couple oxidation of substrates with reduction of dioxygen to water. MCOs are capable of oxidizing a vast range of substrates, varying from aromatic compounds to inorganic compounds such as metals. Although the members of this family have diverse functions, majority of them have three cupredoxin domain repeats. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.
Statistics
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PSSM-Id: 259958
Aligned: 28 rows
Threshold Bit Score: 181.721
Created: 23-Aug-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: Type 1 (T1) Cu binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H C H MClick to see conserved feature residue pattern help
Evidence:
  • Structure:1GSK; Bacillus subtilis endospore Coat Protein binds to copper at the T1 copper binding site.
  • Comment:Type 1 (T1) copper sites are characterized by their conserved H...C...H...M copper ligands.
  • Comment:Some members bind copper at the T1 site with three amino acid residues (HCH), instead of four (HCHM).

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
1GSK_A       367 QNIRTLKLAgtqd-----------eygrPVLLLNnk------------rWHDPVTETPKVG---TTEIWSIINPTr---g 417 Bacillus subtilis
NP_953702    643 MGPREAKLGvlvad----------pmtgMMMSMPm-------------mWADIITEAPVTG---TTEIWEIYNLTm---d 693 Geobacter sulfu...
YP_552663    414 DRVRQMILYdhveksggpvpadikeyvnNTTWNGlesas-----iahdfPSDGISELPRVG---SVEMWEIVYLStmpga 485 Burkholderia xe...
ABL09951     506 DRTRQVSLGevasarv------rgvsprEVLLGVigpnge----prllgWADPITENPAVG---STEIWEIHNLTk---d 569 Streptomyces ec...
YP_003274476 427 DRHRVATLNvtlnprn-----lswlsvlTMNLNNv-------------gFHTRDFEHAEQG---TTECWDLVNADat-mq 484 Gordonia bronch...
YP_006721539 565 VPVRPLTLNevfds----------ygrlLQLLGTnvptan----afglgYMDNATEVVNLVngeKVEIWQIANLTg---d 627 Geobacter metal...
EHI41793     416 SVVRNVSVMqlaqgl--------gqpspLMSLNNl-------------rYTTDDIEMPRQG---TVEQWNIVNVTp---e 468 Rhodococcus opa...
ELR13728     106 AKERDLTLVeinstsp------dgtpivIPTLSGl-------------rFHDPPTETPRVN---TVELWRLINLTp---d 160 Acanthamoeba ca...
YP_314830    541 TVTRPLALLeemsaa-------fedapvEALLGTvafdgngtgvctgrlWMEPVSENPETG---ATEVWEIYNATg---d 607 Thiobacillus de...
YP_412300    522 TFIRRLALLekesssfde--spaaaflgIVLGDPgagpaa----ciargWKDPVTQNPAVG---TTEIWEFYNMTe---d 589 Nitrosospira mu...
Feature 1         #                                                                              
1GSK_A       418 THPIHLHLVSFRVLDRrpfdiaryqesg------------------------------------------------elsy 449 Bacillus subtilis
NP_953702    694 AHPIHPHLVRFEVVDRqpfdmmtfm------------------------------------------------------p 719 Geobacter sulfu...
YP_552663    486 SHPVHIHLSQFQVLNRqaintsqyladwnkafgatgssaaplpggctagtycadygppldyatpnkdgalggnlpfsgyl 565 Burkholderia xe...
ABL09951     570 AHPIHIHEVQFQIVDRqklpvg---------------------------------------------------------- 591 Streptomyces ec...
YP_003274476 485 AHAMHLHLVQFRVVGRwdfdkvrylaenppplfgt-----------------------------------rwtpdpdryr 529 Gordonia bronch...
YP_006721539 628 THPIHFHLVNAQLLGRqpfdvvhyngt--------------------------------------------------pty 657 Geobacter metal...
EHI41793     469 PHPIHLHLVTFRVIGRqaidtnalmqavpvpavgm-----------------------------------rwtpsadpfv 513 Rhodococcus opa...
ELR13728     161 THPIHLHLSQFRLLERrpfdvaaydang------------------------------------------------eivy 192 Acanthamoeba ca...
YP_314830    608 AHPIHIHEVAFEVVNRqdivvdeaegrv------------------------------------------------alap 639 Thiobacillus de...
YP_412300    590 AHPMHVHAVSFELVNRqailvneesgtv------------------------------------------------qlea 621 Nitrosospira mu...
Feature 1                                                                                    #   
1GSK_A       450 tgpavpppPSEKGWKDTIQAHAGEVLRIAATFGPy----------------------------------sGRYVWHCHIL 495 Bacillus subtilis
NP_953702    720 sgpavppePYEQGYKDTVLAYPGQITRVKATFDKi-----------------------------------GLYVWHCHIL 764 Geobacter sulfu...
YP_552663    566 qganlppaAGESGWKDTADAHAGQVLRILVRWTPssipvvpnqsya-------------gqnlyefdptqGYYVWHCHVI 632 Burkholderia xe...
ABL09951     592 --grrppeAWERGFKDTVLAYPQETTRVKVRFSQt-----------------------------------GRYMWHCHLL 634 Streptomyces ec...
YP_003274476 530 tspmfapaPYEFGWKDTVRCPPNQVTRIVVRWPRadeigfdpdv----------------vftglngeklQGYVWHCHLT 593 Gordonia bronch...
YP_006721539 658 igpargpdPNETGFKETIRMNPGEVTTVIMRFKFptvpftvpns-----------------lnpnlgisgKEYVWHCHIL 720 Geobacter metal...
EHI41793     514 lgpnlapqVWESGFKDTVIADANSITRIIVRFPTadelgfdpdatfgmsahtmdhsegghghmeqsshplQGYVWHCHML 593 Rhodococcus opa...
ELR13728     193 tgpplppdPNENGYKDTIRANPDEVTTILVPFEDy----------------------------------tGNYVWHCHIL 238 Acanthamoeba ca...
YP_314830    640 gsepappaAWETGFKDTVIAYPGHVTRVRARFNTp-----------------------------------GQFTWHCHIL 684 Thiobacillus de...
YP_412300    622 gsspvspePWELGRKDTVIAYPSQVTRVRMTFIRe-----------------------------------GQYVWHCHIL 666 Nitrosospira mu...
Feature 1         #    #      
1GSK_A       496 EHEDYDMMRPMDI 508 Bacillus subtilis
NP_953702    765 EHEDNEMMRPYMV 777 Geobacter sulfurreducens PCA
YP_552663    633 THEDNEMMRPYRV 645 Burkholderia xenovorans LB400
ABL09951     635 EHEDNEMMRPLHV 647 Streptomyces echinatus
YP_003274476 594 DHEDNEMMQRIRV 606 Gordonia bronchialis DSM 43247
YP_006721539 721 DHEEHDMMRPLVV 733 Geobacter metallireducens GS-15
EHI41793     594 DHEDHDMMLRYRL 606 Rhodococcus opacus PD630
ELR13728     239 EHEDNDMMRPLVI 251 Acanthamoeba castellanii str. Neff
YP_314830    685 EHEDNEMMRPFRV 697 Thiobacillus denitrificans ATCC 25259
YP_412300    667 EHEDNQMMLPYRI 679 Nitrosospira multiformis ATCC 25196

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