3AW5


Conserved Protein Domain Family
CuRO_3_McoP_like

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cd13888: CuRO_3_McoP_like 
Click on image for an interactive view with Cn3D
The third cupredoxin domain of multicopper oxidase McoP and similar proteins
This subfamily includes archaeal and bacterial multicopper oxidases (MCOs), represented by the extremely thermostable McoP from the hyperthermophilic archaeon Pyrobaculum aerophilum. McoP is an efficient metallo-oxidase that catalyzes the oxidation of cuprous and ferrous ions. It is noteworthy that McoP has three-fold higher catalytic efficiency when using nitrous oxide as electron acceptor than when using dioxygen, the typical oxidizing substrate of multicopper oxidases. McoP may function as a novel archaeal nitrous oxide reductase that is probably involved in the denitrification pathway in archaea. Members of this subfamily contain three cupredoxin domain repeats. The copper ions are bound in several sites; Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 3 of 3-domain MCOs contains the Type 1 (T1) copper binding site and part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.
Statistics
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PSSM-Id: 259955
Aligned: 5 rows
Threshold Bit Score: 218.974
Created: 17-Oct-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: Type 1 (T1) Cu binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H C H MClick to see conserved feature residue pattern help
Evidence:
  • Structure:3AW5; Pyrobaculum aerophilum Multicopper Oxidase binds copper at T1 copper center.
  • Comment:Type 1 (T1) copper sites are characterized by their conserved H...C...H...M copper ligands.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                               #        
3AW5_A       312 TRTRRFALSLs----gMQWTINGMFWnas----npLFEHVSVE-------------GVELWEIVNdkASMPHPMHLHGFP 370 Pyrobaculum aer...
YP_973532    410 ATQRKIELSLe----nMRFLINGRTFv-------mDEIAFDVKr-----------gAVEVWSISNptLGMPHPMHIHGFS 467 Polaromonas nap...
YP_003461151 391 ATERDILLDMa----pMQWRINGETY---------DPDRVPIEve---------anTQEVWTLRNadRSMPHPMHIHGFS 448 Thioalkalivibri...
NP_213770    393 AQVQRITLGMr----rMVFTINGETWe--------DGYANPQDinnpkvlfeqnngDVVIIEYVNn-TGMYHPMHIHGFQ 459 Aquifex aeolicu...
YP_002435599 425 GPPRRLHVSRgevlgrPSWLLNGQPFalrhdtdadLPDDFPALrvp--------grTTEIWELSNdaASIPHALHLSGFQ 496 Desulfovibrio v...
Feature 1                                                                     #    #    #       
3AW5_A       371 MWIIERKDSPrqvaelavdnrgrlPTDLGLKDTVLIWPGETVKIVVNFDakk-rgQLFPFHCHNLEHEDgGMMINIAVK 448 Pyrobaculum aero...
YP_973532    468 FQVLERLGSPaqvsssarfgkgrtAGDLGWKDTVLVWPGETVRIAIDFThdfpgdQTYLLHCHNLEHEDaGMMINFRVQ 546 Polaromonas naph...
YP_003461151 449 FQVLSRSGGPgfvreqavnddgltVADLGWKDTVLLWPGETVRIAIDFThdydgdQLYVFHCHNLEHEDnDMMVNVRVR 527 Thioalkalivibrio...
NP_213770    460 FQVLERSLGPl------------rATDLGWKDTVIVAPMETVRIAVDMShpynehQIYLLHCHILEHHDeGMMVNYRVN 526 Aquifex aeolicus...
YP_002435599 497 LRVLERRDSPpqvaalavapsgcsATDSGIKDTVLVWPGETVRVLVDFRdaspgtQRAALYSRVLECLDdGMVQDVSVP 575 Desulfovibrio vu...

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