1GYC


Conserved Protein Domain Family
CuRO_2_Tv-LCC_like

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cd13882: CuRO_2_Tv-LCC_like 
Click on image for an interactive view with Cn3D
The second cupredoxin domain of the fungal laccases similar to Tv-LCC from Trametes versicolor
This subfamily of fungal laccases includes Tv-LCC from Trametes versicolor and Rs-LCC2 from plant pathogenic fungus Rhizoctonia solani. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism. Laccase is a multicopper oxidase (MCO) composed of three cupredoxin domains that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.
Statistics
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PSSM-Id: 259949
Aligned: 9 rows
Threshold Bit Score: 251.944
Created: 30-Nov-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Domain 3Domain 1
Conserved site includes 20 residues -Click on image for an interactive view with Cn3D
Feature 1:Domain 3 interface [polypeptide binding site]
Evidence:
  • Structure:1GYC: Trametes versicolor Laccase cupredoxin domains 2 and 3 interface; contacts at 4A.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                 # # 
1GYC_A    144 TVITLTDWYHtaarlgp----------rfplgaDATLINGLGRSastpt----aalaVINVQHGkRYRFRLVSISCDPNY 209 Trametes versicolor
Q02081    163 TVVMLEDWYHtpapvlekqmfstnntallspvpDSGLINGKGRYvggpa----vprsVINVKRGkRYRLRVINASAIGSF 238 black scurf of potato
CCA70550  191 TVIFLADWFHtassdllaaytlstntasveqlpQSGTINGVGRTstdtq----pdrpVFTVTSGqRYRFRLINGSAISRF 266 Piriformospora ind...
AEK66725  163 TVITLSDWYHtaarlgs----------afplgpDSVLINGLGRFaggdg---naelaVIPVTQGkRYRFRLISLSCDPNF 229 Yarrowia lipolytica
Q12542    162 TVITLAEWYHvlapdinnef----fssgiipvqDSGLINGKGRFnggpe----tpfaVVNVEQGkRYRFRVIAISCRPFF 233 common mushroom
BAE53753   35 TIWQVGDWWHnssvsllagy----vatgivpvsDSGTFNGVGRFqggpe----vpffVQNVESGkRYRFRIINQSARNVF 106 uncultured Termito...
Q02079    162 TVLIIGDWYHtsskailat------gnitlqqpDSATINGKGRFdpdntpanpntlyTLKVKRGkRYRLRVINSSAIASF 235 black scurf of potato
EIM91692  168 TVITLGDWFHvvspeaf----------nnflnpDSFVINGLGRYdggdq----splaVVDVSAGlRHRFRIVNTACIAGF 233 Stereum hirsutum F...
EJD08221  164 TILTIGDWYHdpapsmfpn------pkhvdpieKATTVNGKGRYpggpk----splsVTSVKKGlRYRLRFISAVCGPTY 233 Fomitiporia medite...
Feature 1               ## ##### ### #   # ######                                             
1GYC_A    210 TFSIDgHNLTVIEVDGINsQPLLVDsIQIFAAQRYSFVLNANQtvGNYWIRANPn------fGTVGFAGGi--------N 275 Trametes versicolor
Q02081    239 TFSIEgHRLTVIEADGIPhQPLPVDsFQIYAGQRYSVIVEANQtaANYWIRAPMtva---gaGTNANLDPt-------nV 308 black scurf of potato
CCA70550  267 NFQIEgHTLTVIEADGENhVPITVDrLVLQPGQRYSVVVTADQavGNYWIRAPMaar---vaGTAPTNWAtds----dnV 339 Piriformospora ind...
AEK66725  230 VFSIDkHNMTVIEADAVShEPVTVDsIHIYAGQRYSFVLSAHRdiDNYWIRALPs------gGTVNFVGGv--------N 295 Yarrowia lipolytica
Q12542    234 TFSVDnHNLTFMEADSVEhDPVEIQnVDIYAAQRVSVILNANQpvDNYWMRAPMt------gGNPDRNPNlni----slT 303 common mushroom
BAE53753  107 TMSVDgHDLTVIETDGTPtTPMTVNqVQMLAGQRYSVVLEANQpvGNYWINAPFt------gGSPANNLNqna----tlS 176 uncultured Termito...
Q02079    236 RMSIQgHKMTVIAADGVStKPYQVDsFDILAGQRIDAVVEANQepDTYWINAPL--------TNVANKTAqalliyeddR 307 black scurf of potato
EIM91692  234 NFSIDrHPFPVIEVDGVEtKPLVTDiVSLWPGQRISVVVNANQsvENYWIRATPfv----lgTSPSNTTGv--------N 301 Stereum hirsutum F...
EJD08221  234 NVSIDgHQMTIIEADGIEtEPLTVDsLQIFASQRYSVVVTADQpiDNYWIRVIPtgaeagngTNESFVGGl--------N 305 Fomitiporia medite...
Feature 1                           
1GYC_A    276 SAILRYQGapvaEPTTTQTTSV 297 Trametes versicolor
Q02081    309 FAVLHYEGapnaEPTTEQGSAI 330 black scurf of potato
CCA70550  340 NAILRYVGadevEPTSTPPALS 361 Piriformospora indica DSM 11827
AEK66725  296 SALIRYDGaaevEPVTNTTMSI 317 Yarrowia lipolytica
Q12542    304 LAILRYKGapevEPTTVNVPGH 325 common mushroom
BAE53753  177 RAILRYAGapaaDPVTPMTLGP 198 uncultured Termitomyces
Q02079    308 RPYHPPKGp--yRKWSVSEAII 327 black scurf of potato
EIM91692  302 AAILRYRGaqeiDPKTESIATN 323 Stereum hirsutum FP-91666 SS1
EJD08221  306 AAILRYEGanntEPTSEPIPNG 327 Fomitiporia mediterranea MF3/22

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