Conserved Protein Domain Family
CuRO_2_CopA_like_1

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cd13870: CuRO_2_CopA_like_1 
The second cupredoxin domain of CopA copper resistance protein like family
The members of this family are copper resistance protein (CopA) homologs. CopA is multicopper oxidase (MCO) related to laccase and L-ascorbate oxidase, both copper-containing enzymes. CopA is involved in copper resistance in bacteria. CopA mutant causes a loss of function, including copper tolerance and oxidase activity, and copA transcription is inducible in the presence of copper. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 2 of 3-domain MCOs has lost the ability to bind copper.
Statistics
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PSSM-Id: 259938
Aligned: 12 rows
Threshold Bit Score: 167.51
Created: 20-Nov-2012
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative Domainputative Domain
Feature 1:putative Domain 3 interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                            # #           ## ##### ### #
YP_002523510 243 PGMTGTSGEPPEvepdlvyPLYVVNGRPLEHPFEFVGKRGDLLRLRLVNAASAIIFRVALAGhRFTVVQADGQPIEPLEG 322 Thermomicrobium...
YP_644600    230 MMGGPGGGPAMSgav--dhPYYLVNGRAAEDPASLAVRRGDRVRLRLMNPSSDTVFRFAAAGhRLTVTHADGLPVRPVTV 307 Rubrobacter xyl...
YP_003738954 192 GRNQMDGGMNMAsrp--dyAGLLANGRLPSNPSEFTIEKGEWLRVRFINASGATTFRVGLGGhRLNITHADGQPVEPVTT 269 Halalkalicoccus...
YP_003290660 208 MGRGMMGGMMGVqvp--pyAGSLINGRLPEAAPVFEVRRGERVRLRLLNPSGASTFRFAIDGhAMLVTHADGRPVEPVRV 285 Rhodothermus ma...
YP_005329244 187 TPAVPDAREVVSfgg-rryPFLLVNGRPPEDPAVVEGRPGDRLRLRVMNVAADTGFRFAIAGhPLTITHTDGMPVEPVTV 265 Blastococcus sa...
YP_829240    280 SRSDFLGGDAGDvr----yPYHLFNGKAPDQAEEFTAKAGEIIRLRIINAAGDTAYRVGIPGrKLTLTHTDGFPVVHKDV 355 Arthrobacter sp...
EAY59225     233 VDSNLLGGDGGDia----yPYYLINGRIPVAATSFKAKPGQRIRIRIINSAADTAFRIALAGhSMTVTHTDGYPVIPTEV 308 Mycobacterium t...
ACF39366     224 MTSPVLSGDSGDvr----yPVYLLNGKPPGDPAVFTARPGQRARIRLINAGDDTAFRVALGGhRLTVTDTDGFPVEPVDT 299 Rhodococcus sp....
ABK58288     123 FESEILGGDAGDvd----yPLHLINGRPTADRPTIDVPAGGRMRLRFINAGSDTAYRVALGGhRMTVTHTDGFPVEPVEV 198 Streptomyces sp...
YP_001701216 239 SAQAPLGADGGDvt----yPYYLINGRVAADPQSVDYRPGTRVRLRIINAAGDSAFRVAIPGtPLTVTHTDGFPVQPRQT 314 Mycobacterium a...
NP_938468    228 TPDRVLGGDAGDvm----yPHYLINGRIPRAHRTFEARPGDKARLRFINSGGDTIFKVALGGhRMTVTHTDGFPVQPWET 303 Corynebacterium...
YP_004998285 200 TPTSPLGADGGDvt----yPYFIINGRGPGDPQVVDYRTGQRIRLRVINAGSDTAFRVAVPGtTMRVIQTDGYPVVPVEA 275 Mycobacterium r...
Feature 1           # ######                                 
YP_002523510 323 DaLRIGMGERYDLLVRLDn-pGIWPLVAWa-eGTDRAAQAVLRY 364 Thermomicrobium roseum DSM 5159
YP_644600    308 DaVRIGMGERYDAILEANn-pGVWQLAAVp-eGKDGLARALLRY 349 Rubrobacter xylanophilus DSM 9941
YP_003738954 270 DsFAFGPGERYDAVVEANn-pGAWAIEARsvdGDEQPATATLRY 312 Halalkalicoccus jeotgali B3
YP_003290660 286 DnLLIGMGERYDVIIEADn-pGRWAIVAVpveGTHPPARAVLHY 328 Rhodothermus marinus DSM 4252
YP_005329244 266 DaLRLGMGERYDVLVDLRqrgGTWQIGVQp-eGRPGQGRAVLRY 308 Blastococcus saxobsidens DD2
YP_829240    356 DaVVLGMGERIDALVTVGd--GYSPVLALp-eGKTGQSVGFIST 396 Arthrobacter sp. FB24
EAY59225     309 DaLLIGMAERYDVMVTAAg--GVFPLVALa-eGKNALARALLST 349 Mycobacterium tuberculosis C
ACF39366     300 DsVLIGMGERYDAVVTLQd--GAFPLVAVa-eGKGAQGFAVVRT 340 Rhodococcus sp. DK17
ABK58288     199 EaILVGMGERYDVIVQPQs--GTWLLVALa-eGKDLTAEATVRT 239 Streptomyces sp. RU06
YP_001701216 315 DaLLIGMGERIDAIITVGe--VSVPLLAAp-yGKDGYAQLVLRS 355 Mycobacterium abscessus
NP_938468    304 EsIYLSMGERVDVEVILGd--GIFPLTALa-vGKDDRAFAVIRT 344 Corynebacterium diphtheriae NCTC 13129
YP_004998285 276 DsVILGMGERVDAIITVN---ESLPVVGVp-eGKQGHARLTIRV 315 Mycobacterium rhodesiae NBB3

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