2XU9


Conserved Protein Domain Family
CuRO_1_Tth-MCO_like

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cd13853: CuRO_1_Tth-MCO_like 
Click on image for an interactive view with Cn3D
The first cupredoxin domain of the bacterial laccases similar to Tth-MCO from Thermus Thermophilus
The subfamily of bacterial laccases includes Tth-MCO and similar proteins. Tth-MCO is a hyperthermophilic multicopper oxidase (MCO) from thermus thermophilus HB27. Laccase is a blue multi-copper enzyme that catalyzes the oxidation of a variety aromatic - notably phenolic and inorganic substances coupled to the reduction of molecular oxygen to water. It has been implicated in a wide spectrum of biological activities and, in particular, plays a key role in morphogenesis, development and lignin metabolism in fungi and plants. Although MCOs have diverse functions, majority of them have three cupredoxin domain repeats that include one mononuclear and one trinuclear copper center. The copper ions are bound in several sites: Type 1, Type 2, and/or Type 3. The ensemble of types 2 and 3 copper is called a trinuclear cluster. MCOs oxidize their substrate by accepting electrons at a mononuclear copper center and transferring them to the active site trinuclear copper center. The cupredoxin domain 1 of 3-domain MCOs contains part the trinuclear copper binding site, which is located at the interface of domains 1 and 3.
Statistics
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PSSM-Id: 259922
Aligned: 69 rows
Threshold Bit Score: 140.081
Created: 10-Sep-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
trinuclear CuDomain 3Domain 2
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1: trinuclear Cu binding site [ion binding site], 4 residue positions
Conserved feature residue pattern:H H H HClick to see conserved feature residue pattern help
Evidence:
  • Structure:2XU9; trinuclear binding site of Laccase From Thermus Thermophilus
  • Comment:Trinuclear copper site ligands are typically one or two HxH motifs that can be in the same domain/subunit or in different domains/subunits.
  • Comment:The trinuclear copper binding site of 3-domain MCOs is located at the interface of cupredoxin domains 1 and 3.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
2XU9_A         16 LLSLKLSATPTPlai--------------------------agQRATLLTYGGSF------------PGPTLRVRPRDTV 57   Thermus therm...
YP_005057563   40 LLEFDLNFKNMQd-----------------------------aDGQEEYCYQSSNg----------gRSPTLRVQPGDKL 80   Acidobacteriu...
YP_590572      54 LLEANLTFERSDv------------------------------AGEARFCYLTDRg----------aLAPTLHVLPGDKL 93   Acidobacteria...
YP_591203      48 VLELTLTARNAAa-----------------------------tNGSARYCFIDASg----------nESPTLRVKPGDLV 88   Acidobacteria...
YP_003899925   65 QLEVTLTLQDLTqveiegfgivkag------dgiipwlnnkptPFEFLRGYNGTI------------PGPMLIVDPGDTL 126  Cyanothece sp...
YP_724408      69 VLEAQISMEEVDqlevpglgilrsgdgrvpwlpspidgepsytPYEALRVYQGKGpdgta--ldpriPGPLFITEPGDKV 146  Trichodesmium...
YP_377392     186 NLLQNLNAEKLQleegt---------------------npnlwYPAMLYSYGLRGegt-------syPGPVLITQPGDQI 237  Synechococcus...
YP_714477      57 VLRVRILVERRQvel--------------------------agHRLWALTYNGLY------------MPPTLRFRPGDRL 98   Frankia alni ...
YP_005059375   22 LGVEVLSAQTTMppigtpl-----------------seppearTPLVLRAVNDPTsgrgafsfegreVPPVIRVSPGQKL 84   Acidobacteriu...
YP_007162042  174 NLLDNLDVAQGEt------------------------------PPLWLPNFLYTYglpngdtvttsyPGPTLIMQPGEDL 223  Cyanobacteriu...
Feature 1                                                      # #                                
2XU9_A         58 RLTLENRLp-------------------------------EPTNLHWHGLPISPk---vDDPFLEIPPg--ESWTYEFTV 101  Thermus therm...
YP_005057563   81 VLHLKNSLklepgavnpmphsvg---mpiespcadaqmtaSSTNLHFHGMNVPAscgqdDVMHTAISPk-nSPFTYHLTI 156  Acidobacteriu...
YP_590572      94 VLHLTNKVppssapavhihgk------dkmqgcgggemtgSSTNIHFHGTTLPPvc-hqDDVLNTLVQp-nEDFDYVIQI 165  Acidobacteria...
YP_591203      89 TIHLKNELtnitpdktsphqhha---sastgpctggamtpVTTNLHFHGLTIPPtc-hqDEVLQTLIHpgdPVFDYSFRI 164  Acidobacteria...
YP_003899925  127 KITLKNDLnd----------------------------pqQGTNFHFHGGHISPlg-hgDNVLINIPPg--NTWTTEIKI 175  Cyanothece sp...
YP_724408     147 KLTLTNNLtkieea--------------------gnhaanVFSNIHTHGFHTSPrg-raDNVLHLIDSg--ETFEYDIQV 203  Trichodesmium...
YP_377392     238 RLNFNNDIrigelnnsqiqqatlvpnstygngasdglggtTSLNYHLHGSHTNPtg-fgDNVVSRFTTg--QKWTTIIDL 314  Synechococcus...
YP_714477      99 DLTMVNRVr-------------------------------PYTNLHIHGLHVSPag-nsDNVFIHIHPg--ETYHYVYQF 144  Frankia alni ...
YP_005059375   85 RITYLNRMqvssgev------------------cvdgpcrNMTNLHFHGLHVSPes-pqDDVLSMMAMp-gESLHYTVDI 144  Acidobacteriu...
YP_007162042  224 RINFDNEItipgltteqiqaatlvrnssygnggsaglggtTSTNFHFHGAHTAPgg-fgDNVVSRYTTg--QSWTTNIDI 300  Cyanobacteriu...
Feature 1                    # #                    
2XU9_A        102 Pk-eLAGTFWYHPHLHGRVApqLFAGLLGALVVE 134  Thermus thermophilus HB27
YP_005057563  157 PvdqPPGLYWYHPHLHGLTNaqVSGGGSGAIVVE 190  Acidobacterium sp. MP5ACTX8
YP_590572     166 PknqPPGLYWYHPHPHGFTElqVQGGASAALVVD 199  Acidobacteria bacterium Ellin345
YP_591203     165 PddePPGLYWYHPHVHGFSRveLLGGASGALIVE 198  Acidobacteria bacterium Ellin345
YP_003899925  176 PdnhEIGPAWYHPHLHGLTNeqLASGLAGYLLVN 209  Cyanothece sp. PCC 7822
YP_724408     204 PtdqTLGMSWYHPHFHGQTNtqLAAGLVGVMQVN 237  Trichodesmium erythraeum IMS101
YP_377392     315 PedhGQGSYWYHPHYHPSVNqqVYGGASGFMQVG 348  Synechococcus sp. CC9902
YP_714477     145 PrtlTPGTYWYHSHGHPHAAsqVAGGMSGIIIVD 178  Frankia alni ACN14a
YP_005059375  145 PldqPSGLYWYHTHPHGESYqqDLDGMSGAIVVE 178  Acidobacterium sp. MP5ACTX8
YP_007162042  301 PddhGIGSYWYHPHYHPSVNaqVYGGQSGFIQIG 334  Cyanobacterium aponinum PCC 10605

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